Return to main results Retrieve Phyre Job Id

Job DescriptionP28903
Confidence30.33%DateThu Jan 5 11:45:16 GMT 2012
Rank141Aligned Residues27
% Identity22%Templatec3mkrB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   638.640.........650.........660......
Predicted Secondary structure 


























Query SS confidence 




























Query Sequence  NTPIDECYECGFTGEFECTSKGFTCPKCG
Query Conservation 
   
 
  

  
     
    

 

Alig confidence 











..














Template Conservation 
   
 

 


..       
 

 

 
Template Sequence  GKPVEKCPLSGA. . CYSPEFKGQICKVTT
Template Known Secondary structure  TS


TTT

..
GGGTTSB
TTTS
Template Predicted Secondary structure 








..








Template SS confidence 




























   11791180.........1190 .........1200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions