Job Description P28903 Confidence 29.31% Date Thu Jan 5 11:45:16 GMT 2012 Rank 151 Aligned Residues 27 % Identity 19% Template c3iydD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex Resolution 19.80 Å

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		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	G	T	N	T	P	I	D	E	C	Y	E	C	G	F	T	G	E	F	E	C	T	S	K	G	F	T	C	P	K	C	G	N	H
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	L	K	H	R	G	V	I	C	E	K	C	G	.	.	.	.	.	.	.	.	V	E	V	T	Q	T	K	V	R	R	E	R
Template Known Secondary structure				S	T	T		S	S				S	S	S		.	.	.	.	.	.	.	.						S	S	T	T	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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