Return to main results Retrieve Phyre Job Id

Job DescriptionP28903
Confidence53.05%DateThu Jan 5 11:45:16 GMT 2012
Rank77Aligned Residues40
% Identity13%Templatec1m2oA_
PDB info PDB header:protein transport/signaling proteinChain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   630.........640.........650.. .......660.........
Predicted Secondary structure 

















....














Query SS confidence 






















. . . .
















Query Sequence  QHVPYYGTNTPIDECYECGFTGE. . . . FECTSKGFTCPKCGNHD
Query Conservation    
 
   
   
 
  

  
 ....    
    

 

   
Alig confidence 






















....
















Template Conservation           
  


  
 





         
 
  
   
Template Sequence  DELNVAPYNPVVCSGPHCKSILNPYCVIDPRNSSWSCPICNSRN
Template Known Secondary structure  TT


S


B

STTT

B

TTS
TTTT

TTT



Template Predicted Secondary structure 





























Template SS confidence 











































   44.....50.........60.........70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions