Job Description P28903 Confidence 100.00% Date Thu Jan 5 11:45:16 GMT 2012 Rank 1 Aligned Residues 555 % Identity 57% Template c1hk8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase; PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp Resolution 2.45 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	K	V	I	P	T	Q	R	D	L	L	A	G	I	V	A	K	H	Y	A	R	Q	H	L	L	P	R	D	V	V	Q	A	H	E	R	G	D	I	H	Y	H	D	L	D	Y	S	P	F	F	P	M	F	N	C	M	L	I	D	L	K	G	M	L	T	Q	G	F	K	M	G	N	A	E	I	E	P	P	K	S
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		D	S	R	V	F	P	T	Q	R	D	L	M	A	G	I	V	S	K	.	H	I	A	K	N	M	V	P	S	F	I	M	K	A	H	E	S	G	I	I	H	V	H	D	I	D	Y	S	P	A	L	P	F	T	N	C	C	L	V	D	L	K	G	M	L	E	N	G	F	K	L	G	N	A	Q	I	E	T	P	K	S
Template Known Secondary structure				S	S															.							S											T	S				T	T	T	T	T	T	T	T	S																S					T	T							S	S
Template Predicted Secondary structure																				.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	T	A	T	A	V	T	A	Q	I	I	A	Q	V	A	S	H	I	Y	G	G	T	T	I	N	R	I	D	E	V	L	A	P	F	V	T	A	S	Y	N	K	H	R	K	T	A	E	E	W	N	I	P	D	A	E	G	Y	A	N	S	R	T	I	K	E	C	Y	D	A	F	Q	S	L	E	Y	E	V	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	V	A	T	A	I	M	A	Q	I	T	A	Q	V	A	S	H	Q	Y	G	G	T	T	F	A	N	V	D	K	V	L	S	P	Y	V	K	R	T	Y	A	K	H	I	E	D	A	E	K	W	Q	I	A	D	A	L	N	Y	A	Q	S	K	T	E	K	D	V	Y	D	A	F	Q	A	Y	E	Y	E	V	N	T
Template Known Secondary structure																		T	T	S	S	S					T	T																							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	T	A	N	G	Q	T	P	F	V	T	F	G	F	G	L	G	T	S	W	E	S	R	L	I	Q	E	S	I	L	R	N	R	I	A	G	L	G	K	N	R	K	T	A	V	F	P	K	L	V	F	A	I	R	D	G	L	N	H	K	K	G	D	P	N	Y	D	I	K	Q	L	A	L	E	C	A	S	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	S	S	N	G	Q	T	P	F	V	T	I	T	F	G	T	G	T	D	W	T	E	R	M	I	Q	K	A	I	L	K	N	R	I	K	G	L	G	R	D	G	I	T	P	I	F	P	K	L	V	M	F	V	E	E	G	V	N	L	Y	K	D	D	P	N	Y	D	I	K	Q	L	A	L	E	C	A	S	K	R
Template Known Secondary structure					T	T	S	S													S																		B	T	T	T	T	B			S		S								T	T	T	T	S	S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420					.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure															.	.																																																.	.	.	.
Query SS confidence															.	.																																																.	.	.	.
Query Sequence		M	Y	P	D	I	L	N	Y	D	Q	V	V	K	.	.	V	T	G	S	F	K	T	P	M	G	C	R	S	F	L	G	V	W	E	N	E	N	G	E	Q	I	H	D	G	R	N	N	L	G	V	I	S	L	N	L	P	R	I	A	L	E	A	.	.	.	.	K	G	D	E	A	T	F	W	K	L	L	D	E	R
Query Conservation															.	.																																																.	.	.	.
Alig confidence															.	.																																																.	.	.	.
Template Conservation
Template Sequence		M	Y	P	D	I	I	S	A	K	N	N	K	A	I	T	G	S	S	V	P	V	S	P	M	G	C	R	S	F	L	S	V	W	K	D	S	T	G	N	E	I	L	D	G	R	N	N	L	G	V	V	T	L	N	L	P	R	I	A	L	D	S	Y	I	G	T	Q	F	N	E	Q	K	F	V	E	L	F	N	E	R
Template Known Secondary structure																	T		S	S					B	T	T	T	B						B		T	T	S		B			T	T		B															T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	A	R	K	A	L	M	T	R	I	A	R	L	E	G	V	K	A	R	V	A	P	I	L	Y	M	E	G	A	C	G	V	R	L	N	A	D	D	D	V	S	E	I	F	K	N	G	R	A	S	I	S	L	G	Y	I	G	I	H	E	T	I	N	A	L	F	G	G	E	H	V	Y	D	N	E	Q	L	R
Query Conservation
Alig confidence																																																																			.						.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.						.	.	.	.	.	.	.	.	.
Template Sequence		M	D	L	C	F	E	A	L	M	C	R	I	S	S	L	K	G	V	K	A	T	V	A	P	I	L	Y	Q	E	G	A	F	G	V	R	L	K	P	D	D	D	I	I	E	L	F	K	N	G	R	S	S	V	S	L	G	Y	I	G	I	H	E	L	N	I	.	L	V	G	R	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	T		B	G	G	G						T	S	S	T	T	S	S				T	T	S	B	T					T	T	T	T	S															.			T	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.						.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	I	A	I	V	E	R	L	R	Q	A	V	D	Q	W	K	E	E	T	G	Y	G	F	S	L	Y	S	T	P	S	E	N	L	C	D	R	F	C	R	L	D	T	A	E	F	G	V	V	P	G	V	T	D	K	G	Y	Y	T	N	S	F	H	L	D	V	E	K	K	V	N	P	Y	D	K	I	D	F	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	G	R	E	I	L	T	K	M	N	A	H	L	K	Q	W	T	E	R	T	G	F	A	F	S	L	Y	S	T	P	A	E	N	L	C	Y	R	F	C	K	L	D	T	E	K	Y	G	S	V	K	D	V	T	D	K	G	W	Y	T	N	S	F	H	V	S	V	E	E	N	I	T	P	F	E	K	I	S	R	E
Template Known Secondary structure		.																					S											T	T																	T	T	T	T	T	T	S					T	T				T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Y	P	P	L	A	N	G	G	F	I	C	Y	G	E	Y	P	N	I	Q	H	N	L	K	A	L	E	D	V	W	D	Y	S	Y	Q	H	V	P	Y	Y	G	T	N	T	P	I	D	E	C	Y	E	C	G	F	T	G	E	F	E	C	T	S	K	G	F	T	C	P	K	C	G	N	H	D	A	S	R	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	Y	H	F	I	A	T	G	G	H	I	S	Y	V	E	L	P	D	M	K	N	N	L	K	G	L	E	A	V	W	D	Y	A	A	Q	H	L	D	Y	F	G	V	N	M	P	V	D	K	C	F	T	C	G	S	T	H	E	M	T	P	T	E	N	G	F	V	C	S	I	C	G	E	T	D	P	K	K	M	N
Template Known Secondary structure						T	T		T	T	B											T	T																	S												T	T	T				S						S	S	S				S	S	S					G	G	G
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		675	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	R	R	V	C	G	Y	L	G	S	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	R	R	T	C	A	Y	L	G	N	P	N
Template Known Secondary structure				B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.