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Job DescriptionP77161
Confidence100.00%DateThu Jan 5 12:25:47 GMT 2012
Rank9Aligned Residues284
% Identity32%Templatec3pefA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTK
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Template Sequence  KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPEVVESCPVTFAMLADPAAAEEVCFGKHGVLE
Template Known Secondary structure 

STT

SSGGGGTT

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGG
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Template Sequence  GIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKIIHLGD
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TT

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  NGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNL
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Template Sequence  VGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRL
Template Known Secondary structure  TTTT

STT

TT



SSB
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   242.......250.........260.........270.........280.....
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Query Sequence  ALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALEL
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Template Sequence  AVALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAIFKTYER
Template Known Secondary structure  T


TT
TTSBGGGGGGGG

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   244.....250.........260.........270.........280.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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