Job Description P77161 Confidence 100.00% Date Thu Jan 5 12:25:47 GMT 2012 Rank 12 Aligned Residues 283 % Identity 20% Template c3l6dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		M	K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	.	D	E	L	L	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C
Query Conservation																																					.
Alig confidence																																					.																																											.	.
Template Conservation																																																																																.	.
Template Sequence		F	D	V	S	V	I	G	L	G	A	X	G	T	I	X	A	Q	V	L	L	K	Q	G	K	R	V	A	I	W	N	R	S	P	G	K	A	A	A	L	V	A	A	G	A	H	L	C	E	S	V	K	A	A	L	S	A	S	P	A	T	I	F	V	L	L	D	N	H	A	T	H	E	V	L	G	X	P	G	.	.
Template Known Secondary structure			S							S													T	T								S											T	T					S	S								S	S							S	S										S	T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	R	A	L	A	H	R	T	I	V	D	Y	T	T	N	A	Q	D	E	G	L	A	L	Q	G	L	V	N	Q	A	G	G	H	Y	V	K	G	X	I	V	A	Y	P	R	N	V	G	H	R	E	S	H	S	I	H	T	G	D	R	E	A	F	E	Q	H	R	A	L	L	E	G	L	A	G	H	T	V	F	L
Template Known Secondary structure							T	T							S																	T	T										S		G	G	G	T	T		T	T															T					T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.																				.
Query SS confidence																																																				.	.																				.
Query Sequence		G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	.	.	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	.	G	F	K	I	A	L	H	Q
Query Conservation																																																				.	.																				.
Alig confidence				.																																																.	.																				.
Template Conservation				.
Template Sequence		P	W	.	D	E	A	L	A	F	A	T	V	L	H	A	H	A	F	A	A	X	V	T	F	F	E	A	V	G	A	G	D	R	F	G	L	P	V	S	K	T	A	R	L	L	L	E	T	S	R	F	F	V	A	D	A	L	E	E	A	V	R	R	L	E	T	Q	D	F	K	G	D	Q	A	R	L	D	V	H	A
Template Known Secondary structure				.																															T	T																																T				T	T	S	S	B
Template Predicted Secondary structure				.
Template SS confidence
		168	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G	S	Q	L	D	H	S	A	L	V	Q	A	L	E	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	F	A	H	I	A	Q	S	L	H	A	Q	G	V	W	T	P	V	F	D	A	V	C	Q	V	V	Q	R	A	A	A	X	G	Y	G	D	Q	D	I	A	A	T	T	K	S	F	A	R	E
Template Known Secondary structure															T																			T	T	T	T	T	S	B	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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