Job Description P77161 Confidence 99.94% Date Thu Jan 5 12:25:47 GMT 2012 Rank 35 Aligned Residues 260 % Identity 13% Template c3k96B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii Resolution 2.10 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	.	.	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V
Query Conservation				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	H	P	I	A	I	L	G	A	G	S	W	G	T	A	L	A	L	V	L	A	R	K	G	Q	K	V	R	L	W	S	Y	E	S	D	H	V	D	E	M	Q	A	E	G	V	N	N	R	Y	L	P	N	Y	P	F	P	E	T	L	K	A	Y	C	D	L	K	A	S	L	E	G	V	T	D	I	L	I	V	V
Template Known Secondary structure				S								S												T	T	T								S												S	S	B	T	T	T	B	T	T					T	T					S							T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	.	.	.	.	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E
Query Conservation																																					.	.	.	.
Alig confidence						.	.	.	.																												.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		P	S	F	A	.	.	.	.	F	H	E	V	I	T	R	M	K	P	L	I	D	A	K	T	R	I	A	W	G	T	K	G	L	A	K	G	S	R	L	L	H	E	V	V	A	T	E	L	G	Q	V	P	M	A	V	I	S	G	P	S	L	A	T	E	V	A	A	N	L	P	T	A	V	S	L	A	S	N	N	S
Template Known Secondary structure						.	.	.	.									T	T	T			T	T									S			T	T	T													S								S	S								T	T										S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		84	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	S	K	D	L	I	E	R	L	H	G	Q	R	F	R	V	Y	K	N	D	D	M	I	G	V	E	L	C	G	S	V	K	N	I	L	A	I	A	T	G	I	S	D	G	L	K	L	G	S	N	A	R	A	A	L	I	T	R	G	L	T	E	M	G	R	L	V	S	V	F	G	G	K	Q	E	T	L	T	G
Template Known Secondary structure														S	S							S																									T	T																									T							T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.												.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I	A	L	H	.	.	.	.	.	.	.	.	.	.	.	Q	K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	L	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	L	A	L	G	E	G	V	D	K	K	E	A	Q	Q	A	I	G	Q	A	I	E	G	L	Y	N	T	D	Q	V	H	A	L	A	Q	K	H	A	I	E	M	P	L	T	F	Q	V	H	R	I	L	H
Template Known Secondary structure		T	T	T											T	T												T	T												S																		T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions