Job Description P77161 Confidence 97.55% Date Thu Jan 5 12:25:47 GMT 2012 Rank 357 Aligned Residues 204 % Identity 10% Template c3f46A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methenyltetrahydromethanopterin hydrogenase; PDBTitle: the crystal structure of c176a mutated [fe]-hydrogenase (hmd)2 holoenzyme from methanocaldococcus jannaschii Resolution 1.95 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		G	L	K	V	T	S	D	D	R	E	A	V	E	G	A	D	I	V	I	T	W	L	P	K	G	N	K	Q	.	.	.	P	D	I	I	K	K	F	A	D	A	I	P	E	G	A	I	V	T	H	A	A	T	I	P	T	T	K	F	A	K	I	F	K	D	L	G	R	E	D	L	N	I	T	S	Y	H	P	G	C
Template Known Secondary structure		T					S							T	T		S								S	S	S			.	.	.						T	T	G	G	G	S		T	T							T	T	S												T	T		T	T	S						B		S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	.	L	F	A	S	K	A	G	A	D	P	V	R	V
Query Conservation																																																																				.
Alig confidence				.																																					.																											.
Template Conservation				.																																					.
Template Sequence		V	P	.	E	M	K	G	Q	V	Y	I	A	E	G	Y	A	S	E	E	A	V	N	K	L	Y	E	I	G	K	I	A	R	G	K	A	F	K	M	P	.	A	N	L	I	G	P	V	C	D	M	C	S	A	V	T	A	T	V	Y	A	G	L	L	A	Y	R	D	A	V	T	K	I	L	G	A	P	A	D	F	A
Template Known Secondary structure			T	.	T	T									S	S	S																	S							.									S	T	T																					T	S
Template Predicted Secondary structure				.																																					.
Template SS confidence
		205	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		201	.											.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	.	.	.	.	.	.	.	.	.	.	A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I	A	L	H	Q	K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L
Query Conservation				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																													.
Template Sequence		Q	M	M	A	D	E	A	L	T	Q	I	H	N	L	M	K	E	K	G	I	A	N	M	E	E	A	L	D	P	A	A	L	L	G	T	A	D	S	M	C	F	G	P	.	L	A	E	I	L	P	T	A	L	K	V	L	E	K	H	K	V
Template Known Secondary structure																					G	G	G	G	G	G	T	S		G	G	G	G	T	T	T	G	G	G	G		S	G	G	.	G	T	T												T
Template Predicted Secondary structure																																													.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions