Job Description P77161 Confidence 100.00% Date Thu Jan 5 12:25:47 GMT 2012 Rank 4 Aligned Residues 292 % Identity 39% Template c3ckyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		M	K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	.	D	E	L	L	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		I	K	I	G	F	I	G	L	G	A	M	G	K	P	M	A	I	N	L	L	K	E	G	V	T	V	Y	A	F	D	L	M	E	A	N	V	A	A	V	V	A	Q	G	A	Q	A	C	E	N	N	Q	K	V	A	A	A	S	D	I	I	F	T	S	L	P	N	A	G	I	V	E	T	V	M	N	G	P	G	G	V
Template Known Secondary structure											T	T											T	T								S	S									T	T	T					S	S									S							S	S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	C	K	A	G	T	V	I	V	D	M	S	S	V	S	P	S	S	T	L	K	M	A	K	V	A	A	E	K	G	I	D	Y	V	D	A	P	V	S	G	G	T	K	G	A	E	A	G	T	L	T	I	M	V	G	A	S	E	A	V	F	E	K	I	Q	P	V	L	S	V	I	G	K	D	I	Y	H	V
Template Known Secondary structure					S		T	T																								T	T										S								T								S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	.	N	P	G	F	K	I	A	L	H	Q	K	D
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		G	D	T	G	A	G	D	A	V	K	I	V	N	N	L	L	L	G	C	N	M	A	S	L	A	E	A	L	V	L	G	V	K	C	G	L	K	P	E	T	M	Q	E	I	I	G	K	S	S	G	R	S	Y	A	M	E	A	K	M	E	K	F	I	M	S	G	D	F	A	G	G	F	A	M	D	L	Q	H	K	D
Template Known Secondary structure			S	T	T																														T	T												T	S	T	T															T				S	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G	S	Q	L	D	H	S	A	L	V	Q	A	L	E	L	M	A	N	H	K	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	A	L	E	A	G	K	E	G	N	V	P	L	P	M	T	A	M	A	T	Q	I	F	E	G	G	R	A	M	G	L	G	R	E	D	M	S	A	V	I	K	V	W	E	Q	M	T	G	V	S	V	S
Template Known Secondary structure													T																			T	T		T	T	S	B	G	G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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