Job Description P77161 Confidence 99.83% Date Thu Jan 5 12:25:47 GMT 2012 Rank 69 Aligned Residues 186 % Identity 11% Template c2rafC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T
Query Conservation
Alig confidence																																						.	.																													.	.	.
Template Conservation																																						.	.																													.	.	.
Template Sequence		X	E	I	T	I	F	G	K	G	N	X	G	Q	A	I	G	H	N	F	E	I	A	G	H	E	V	T	Y	Y	G	S	K	D	Q	A	T	.	.	T	L	G	E	I	V	I	X	A	V	P	Y	P	A	L	A	A	L	A	K	Q	Y	A	T	Q	L	K	G	.	.	.	K	I	V	V	D	I	T	N	P	L	N
Template Known Secondary structure										S												T	T	T								T	T					.	.	S			S						S												T					T	T	.	.	.	S									B
Template Predicted Secondary structure																																						.	.																													.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	.	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		F	D	T	W	D	D	L	V	V	P	A	D	S	S	A	A	Q	E	L	Q	Q	Q	L	P	D	S	Q	V	L	K	A	F	N	T	T	F	A	A	T	L	Q	S	G	Q	V	N	G	K	E	P	T	T	V	L	V	A	G	N	D	D	S	A	K	Q	R	F	T	R	A	L	A	D	S	P	L	E	V	K	D	A
Template Known Secondary structure		T	T	T	S	S		B	S	S		T	T												T	T	S						S	T	T	S								S			T	T	T										S												T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		G	K	L	K	R	A	R	E	L	E	.	.	.	.	.	A	X	G	F	X	Q	X	T	L	A	A	S	E	Q	I	G	W	T	G	G	F	A
Template Known Secondary structure			S	G	G	G						.	.	.	.	.												T	T	S	S		T	T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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