Job Description P77161 Confidence 99.76% Date Thu Jan 5 12:25:47 GMT 2012 Rank 79 Aligned Residues 236 % Identity 16% Template c2qytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from porphyromonas2 gingivalis w83 Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.															.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																									.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	.	.	.	.	.	.	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F
Query Conservation																									.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	I	A	V	F	G	L	G	G	V	G	G	Y	Y	G	A	X	L	A	L	R	A	A	A	T	D	G	L	L	E	V	S	W	I	A	R	G	A	H	L	E	A	I	R	A	A	G	G	L	R	V	V	T	P	S	R	D	F	L	A	R	P	T	C	V	T	D	N	P	A	E	V	G	T	V	D	Y	I	L
Template Known Secondary structure										S																	T	T	S	S																			T	S						S	S								S				S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.																											.	.
Query SS confidence																																																			.	.	.																											.	.
Query Sequence		I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	.	.	.	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	.	.
Query Conservation																																																			.	.	.																											.	.
Alig confidence									.	.	.	.																																							.	.	.																											.	.
Template Conservation									.	.	.	.
Template Sequence		F	C	T	K	D	Y	D	.	.	.	.	X	E	R	G	V	A	E	I	R	P	X	I	G	Q	N	T	K	I	L	P	L	L	N	G	A	D	I	A	E	R	X	R	T	Y	L	P	D	T	V	V	W	K	G	C	V	Y	I	S	A	R	K	S	A	P	G	L	I	T	L	E	A	D	R	E	L	F	Y	F	G
Template Known Secondary structure					S	S	S		.	.	.	.									G	G	G											S		S	S	S						T	T	T	S		T	T	T	B														T	T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
					136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																				.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	E	A	L	L	F	A	S	K	A
Query Conservation		.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	P	E	Q	T	D	D	E	V	R	L	A	E	L	L	T	A	A	G	I	R	A	Y	N	P	T	D	I	D	W	Y	I	X	K	K	F	X	X	I	S	V	T	A	T	A	T	A	Y	F	D	K	P	I	G	S	I	L	T	E	H	E	P	E	L	L	S	L	L	E	E	V	A	E	L	F	R	A	K
Template Known Secondary structure				S	S	S															T	T							S																								T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I	A	L	H	Q	K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	V	V	Q	Q	L	L	D	K	Q	R	K	X	E	T	L	T	.	.	.	.	.	.	.	.	.	.	.	G	Y	V	V	R	E	A	E	A	L	R	V	D	L	P	X	Y	K	R	X	Y	R	E	L
Template Known Secondary structure		T	S			.	.	.	.	.	.	.	.	.	.	.	.		S	S														T	T	T	.	.	.	.	.	.	.	.	.	.	.										T	T												T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.													.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.												.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions