Job Description P77161 Confidence 99.89% Date Thu Jan 5 12:25:47 GMT 2012 Rank 55 Aligned Residues 241 % Identity 13% Template c2pv7B_ PDB info PDB header:isomerase, oxidoreductase Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm) PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution Resolution 2.00 Å

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		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		K	L	G	F	I	.	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T
Query Conservation							.
Alig confidence							.																														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		K	I	V	I	V	G	G	Y	G	K	L	G	G	L	F	A	R	Y	L	R	A	S	G	Y	P	I	S	I	L	D	R	E	D	W	A	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	S	I	L	A	N	A	D	V	V	I	V	S	V	P	I	.	.	.	.	N	L	T	L	E	T	I	E	R	L	K
Template Known Secondary structure							T	T	T	S													T	T								T	T		G	G	.	.	.	.	.	.	.	.	.	.	.	.	G						T	T		S								G	.	.	.	.	G	G									G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		P	Y	L	T	E	N	X	L	L	A	D	L	T	S	V	K	R	E	P	L	A	K	X	L	E	V	H	T	G	A	.	V	L	G	L	H	P	X	F	G	A	D	I	A	S	X	A	K	Q	V	V	V	R	C	D	G	R	F	P	E	R	Y	E	W	L	L	E	Q	I	Q	I	W	G	A	K	I	Y	Q	T	N
Template Known Secondary structure		G	G			T	T	S							S														S	S		.							S	S		T	T		S			T	T											G	G	G	T										T	T
Template Predicted Secondary structure																																.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	.	.	.	.	.	.	.	.	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence													.																	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation													.																	.	.	.
Template Sequence		A	T	E	H	D	H	N	X	T	Y	I	.	Q	A	L	R	H	F	S	T	F	A	N	G	L	H	L	S	.	.	.	K	Q	P	I	N	L	A	N	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	X	I	G	R	L	F	A	Q	D	A	E	L	Y	A	D	I	I	X	D	K	S	E	N	L	A	V	I
Template Known Secondary structure													.	T																.	.	.	T	S	S									T														G	G	G	G	S										T	T
Template Predicted Secondary structure													.																	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	Q	K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		E	T	L	K	Q	T	Y	D	E	A	L	T	F	F	E	N	N	D	R	.	.	.	.	.	Q	G	F	I	D	A	F	H	K	V	R	D
Template Known Secondary structure																	T	T			.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.						340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions