Job Description P77161 Confidence 98.11% Date Thu Jan 5 12:25:47 GMT 2012 Rank 278 Aligned Residues 123 % Identity 12% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.			.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.										.	.							.															.	.	.	.	.															.	.
Query SS confidence													.	.	.	.										.	.							.															.	.	.	.	.															.	.
Query Sequence		K	L	G	F	I	G	L	G	I	M	G	.	.	.	.	T	P	M	A	I	N	L	A	R	.	.	A	G	H	Q	L	H	.	V	T	T	I	G	P	V	A	D	E	L	L	S	L	.	.	.	.	.	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	.	.	S	D	I	I	F	I	M	V	P	D	T	P
Query Conservation													.	.	.	.										.	.							.															.	.	.	.	.															.	.
Alig confidence													.	.	.	.										.	.							.															.	.	.	.	.															.	.
Template Conservation
Template Sequence		R	V	G	F	V	G	L	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	D	S	L	E	S	F	A	Q	Y	K	D	I	D	M	I	V	V	S	V	K	V	P	E
Template Known Secondary structure							S			S	T	T	S					T								T	T	T	T									S	S											T	T		T	T					S									T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																												.																		.
Query SS confidence																												.																		.
Query Sequence		Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	.	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	.	G	G	D	Y	L	D	A	P	V	S	G	G	E	I
Query Conservation																												.																		.
Alig confidence																												.																		.
Template Conservation
Template Sequence		H	Y	E	V	V	K	N	I	L	E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A	N	L	Q	T	I	I	C	L	Q	G	R	K	S	P
Template Known Secondary structure												T	T	T	T		S	S								S	S	S	S	S	S													T		T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions