 |
Job Description | P77161 | Confidence | 98.37% | Date | Thu Jan 5 12:25:47 GMT 2012 |
Rank | 235 | Aligned Residues | 89 |
% Identity | 13% | Template | c2i99A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:mu-crystallin homolog; |
PDBTitle: crystal structure of human mu_crystallin at 2.6 angstrom
|
Resolution | 2.60 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | G | F | I | G | L | G | I | M | G | T | P | M | A | I | N | L | A | R | A | G | . |
. |
H | Q | L | H | V | T | T | I | G | P | V | A | D | E | L | L | S | L | . |
. |
. |
. |
G | A | V | S | V | E | T | A | R | Q | V | T | E | A | S | D | I | I | F | I | M | V | P | D | T | P | Q | V | E | E | V | L | F | G |
Query Conservation |   |
|
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
| . | . |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |   | . | . | . | . | . | . | . | . |
Template Sequence |   |
V | L | C | I | L | G | A | G | V | Q | A | Y | S | H | Y | E | I | F | T | E | Q | F | S | F | K | E | V | R | I | W | N | R | T | K | E | N | A | E | K | F | A | D | T | V | Q | G | E | V | R | V | C | S | S | V | Q | E | A | V | A | G | A | D | V | I | I | T | V | T | L | A | T | E | . |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |
| S | S |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
| S | S | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | G | C | T | K | A | S | L | K | G | K | T | I | V | D | M | S | S | I | S | P | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
P | I | L | F | G | E | W | V | K | P | G | A | H | I | N | A | V | G | A | S | R | P | D |
Template Known Secondary structure |   |
|
| B |
| G | G | G | S |
| T | T |
|  |  |  |  |
|
|
|
| S | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|