Job Description P77161 Confidence 99.85% Date Thu Jan 5 12:25:47 GMT 2012 Rank 66 Aligned Residues 237 % Identity 13% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A
Query Conservation
Alig confidence																							.	.	.	.																		.	.																														.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																		.	.																														.	.	.	.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	V	Y	G	.	.	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	Y	I	K	T	V	A	N	H	L	.	.	.	.	.	.	.
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S									T	T	T	T	.	.					T	T											S										T	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																		.	.																														.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		N	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	.	.	.	.	.	K	S	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	E	G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	S	G	K	Y	F	V	I	E	K	K
Template Known Secondary structure				S	S								S	S	S		S	T	T	T		.	.	.	.	.	S	S	S								S				T	T	G	G	G		G	G	G									T	T													S	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	D	.	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I	A	L	H	Q	K	D	L	N	L
Query Conservation				.
Alig confidence				.										.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		K	A	Y	H	L	A	A	V	I	A	S	N	.	.	.	.	F	P	V	A	L	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D	E	P	E	L	L	.	.	.	.	.	.	.	.	I	H	T	L	X	K	G	V	A	D	N	I	K	K	X	R	V	E	C	S	L	T	G	P	V	K	R	G	D	W	Q	V
Template Known Secondary structure													T	.	.	.	.																T	T		S						.	.	.	.	.	.	.	.															S								S
Template Predicted Secondary structure														.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		242	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		A	L	.	.	.	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		V	E	E	E	R	R	E	Y	E	K	I	F	G	N	T	V	L	Y	D	E	I	V	K	L	L	R	E	V	A	E	S
Template Known Secondary structure													S	S		S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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