Job Description P77161 Confidence 99.88% Date Thu Jan 5 12:25:47 GMT 2012 Rank 59 Aligned Residues 259 % Identity 19% Template c2f1kD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		M	K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	.	.	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G
Query Conservation																																											.	.
Alig confidence																																											.	.																									.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		M	K	I	G	V	V	G	L	G	L	I	G	A	S	L	A	G	D	L	R	R	R	G	H	Y	L	I	G	V	S	R	Q	Q	S	T	C	E	K	A	V	E	R	Q	L	V	D	E	A	G	Q	D	L	S	L	L	Q	T	A	K	I	I	F	L	C	T	P	I	.	.	.	.	Q	L	I	L	P	T	L	E	K
Template Known Secondary structure										S													T	T								S											T	T	S		S				S		G	G	G	G	T	T		S						S		G	.	.	.	.	G	G
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																			.	.	.	.											.	.
Query SS confidence																																																			.	.	.	.											.	.
Query Sequence		C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	.	.	.	.	E	G	T	L	S	I	M	V	G	G	.	.	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L
Query Conservation																																																			.	.	.	.											.	.
Alig confidence																																																			.	.	.	.											.	.
Template Conservation
Template Sequence		L	I	P	H	L	S	P	T	A	I	V	T	D	V	A	S	V	K	T	A	I	A	E	P	A	S	Q	L	W	S	G	F	I	G	G	H	P	A	G	T	A	A	Q	G	I	D	G	A	E	E	N	L	F	V	N	A	P	Y	V	L	T	P	T	E	Y	T	D	P	E	Q	L	A	L	R	S	V	L	E	P	L
Template Known Secondary structure			G	G	G	S		T	T								S			T	T	T									T	T										S			S	G	G	G			S	S	T	T	T	T									T	T													G	G	G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I
Query Conservation
Alig confidence																							.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation																							.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		G	V	K	I	Y	L	C	T	P	A	D	H	D	Q	A	V	A	W	I	S	H	.	.	.	.	.	L	P	V	M	V	S	A	A	L	I	Q	A	C	A	G	E	K	D	G	D	I	L	K	L	A	Q	N	L	A	S	S	G	F	R	D	T	S	R	V	G	G	G	.	.	.	.	.	.	N	P	E	L	G	T
Template Known Secondary structure		T																			T		.	.	.	.	.															T		S																					T	G	G	G	S	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	Q	K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G	S	Q	L	D	H	S	A	L	V	Q	A	L	E	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.															.	.	.	.
Template Conservation																			.	.	.	.	.	.	.															.	.	.	.
Template Sequence		M	M	A	T	Y	N	Q	R	A	L	L	K	S	L	Q	D	Y	.	.	.	.	.	.	.	R	Q	H	L	D	Q	L	I	T	L	I	S	N	Q	.	.	.	.	Q	W	P	E	L	H	R	L	L	Q	Q
Template Known Secondary structure							T												.	.	.	.	.	.	.													T	T	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions