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Job DescriptionP77161
Confidence99.88%DateThu Jan 5 12:25:47 GMT 2012
Rank59Aligned Residues259
% Identity19%Templatec2f1kD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70........
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Query Sequence  MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSL. . GAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENG
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Template Sequence  MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPI. . . . QLILPTLEK
Template Known Secondary structure 


STT

S
TTS
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GGGGTT
S
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G....GG
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   1........10.........20.........30.........40.........50.........60....... ..70......
 
   7980.........90.........100.........110.........120....... ..130....... ..140.........150..
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Query Sequence  CTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAR. . . . EGTLSIMVGG. . DEAVFERVKPLFELL
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Template Sequence  LIPHLSPTAIVTDVASVKTAIAEPASQLWSGFIGGHPAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLALRSVLEPL
Template Known Secondary structure  GGGS
TT


S

TTT
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S

SGGG

SSTTTT


TT



GGG
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   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  GKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKI
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Template Sequence  GVKIYLCTPADHDQAVAWISH. . . . . LPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRVGGG. . . . . . NPELGT
Template Known Secondary structure  T


T.....T
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   159160.........170......... 180.........190.........200.........210.........220. ......
 
   233......240.........250.........260.........270.........280.....
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Query Sequence  ALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALEL
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Template Sequence  MMATYNQRALLKSLQDY. . . . . . . RQHLDQLITLISNQ. . . . QWPELHRLLQQ
Template Known Secondary structure  T.......TT....
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   228.230.........240.... .....250........ .260.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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