Job Description P77161 Confidence 99.72% Date Thu Jan 5 12:25:47 GMT 2012 Rank 87 Aligned Residues 250 % Identity 14% Template c2d3tB_ PDB info PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																										.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	V	E	T	A	R	Q	V	T	E	A	S
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																																											.
Template Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	S	K	G	T	P	I	L	M	K	D	I	N	E	H	G	I	E	Q	G	L	A	E	A	A	K	L	L	V	G	R	V	D	K	G	R	M	T	P	A	K	M	A	E	V	L	N	G	I	R	P	T	L	S	Y	.	G	D	F	G	N	V
Template Known Secondary structure		S							T	T												T	T								S	S																				T	T	T	S	S																S	S	G	.	G	G	G	G	G
Template Predicted Secondary structure																																																																											.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G
Query Conservation
Alig confidence																.	.																														.	.	.
Template Conservation																.	.																														.	.	.
Template Sequence		D	L	V	V	E	A	V	V	E	N	P	K	V	K	.	.	Q	A	V	L	A	E	V	E	N	H	V	R	E	D	A	I	L	A	S	N	T	S	T	I	S	I	S	L	L	.	.	.	A	K	A	L	K	R	P	E	N	F	V	G	M	H	F	F	N	P	V	H	M	M	P	L	V	E	V	I	R	G	E	K
Template Known Secondary structure		S								S						.	.								T	T	T	S		S	S								S	S	S						.	.	.	T	T	T	S	S		G	G	G								S	S	T	T	T										T	T
Template Predicted Secondary structure																.	.																														.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	E	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.																								.
Template Conservation																											.	.	.	.	.	.	.	.																								.
Template Sequence		S	S	D	L	A	V	A	T	T	V	A	Y	A	K	K	M	G	K	N	P	I	V	V	N	D	.	.	.	.	.	.	.	.	C	P	G	F	L	V	N	R	V	L	F	P	Y	F	G	G	F	A	K	L	V	S	A	.	G	V	D	F	V	R	I	D	K	V	M	E	K	F	G	W	P	M	G	P	A	Y	L
Template Known Secondary structure																	T	T									.	.	.	.	.	.	.	.		T	T	T	T																		T	.	T														T		S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.																								.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.									.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I	A	L	H	Q	K	D	L	N	L	A	L	Q	S	A	.	.	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G	S	Q	L	D	H
Query Conservation																																.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.
Template Sequence		M	.	.	.	.	.	.	.	.	.	.	D	V	V	G	I	D	T	G	H	H	G	R	D	V	M	A	E	G	F	P	D	R	M	K	D	D	R	R	S	A	I	D	A	L	Y	E	A	K	R	L	G	Q	K	N	G	K	G	F	Y	A	Y
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.																	T	T									S									T	T	T			B	T	T	T	T	B	S	S	S	B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		541											.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions