Job Description P77161 Confidence 99.86% Date Thu Jan 5 12:25:47 GMT 2012 Rank 60 Aligned Residues 272 % Identity 17% Template c1wpqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad+], PDBTitle: ternary complex of glycerol 3-phosphate dehydrogenase 12 with nad and dihydroxyactone Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.													.	.	.	.	.	.	.																40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	D	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	C	I	V	G	S	G	N	W	G	S	A	I	A	K	I	V	G	G	N	A	A	Q	L	A	Q	F	D	P	R	V	T	M	W	V	F	E	E	D	I	G	G	K	K	L	T	E	I	I	N	T	Q	H	E	N	V	K	Y	L	P	G	H	K	L	P	P	N	V	V	A	V	P	D	V	V	Q	A	A	E
Template Known Secondary structure									S																		S	S															T	T														T	T	T	S	T	T					T	T					S							T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	.	.	.	.	.	.	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E
Query Conservation																																									.	.	.	.	.	.
Alig confidence															.	.	.	.																							.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		D	A	D	I	L	I	F	V	V	P	H	Q	F	.	.	.	.	I	G	K	I	C	D	Q	L	K	G	H	L	K	A	N	P	T	G	I	S	L	I	K	G	V	D	E	G	P	N	G	L	K	L	I	S	E	V	I	G	E	R	L	G	I	P	M	S	V	L	M	G	A	N	I	A	S	E	V	A	D	E	K
Template Known Secondary structure		T		S						S					.	.	.	.									T	T		S		S	S														T	T													T	T								S	S								T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	C	E	T	T	I	G	C	K	D	P	A	Q	G	Q	L	L	K	E	L	M	Q	T	P	N	F	R	I	T	V	V	Q	E	V	D	T	V	E	I	C	G	A	L	K	N	V	V	A	V	G	A	G	F	C	D	G	L	G	F	G	D	N	T	K	A	A	V	I	R	L	G	L	M	E	M	I	A	F	A	K
Template Known Secondary structure										S														B	T	T							S																									T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		192	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.			.	.	.
Predicted Secondary structure						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		K	A	G	A	.	.	.	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	G	F	K	I	A	L	H	Q	K	D	L	.	.	.	.	.	.	.	.	.	.	.	.	N	L	A	L	Q	S	A	K	A	L	A	L	.	.	N	L	P
Query Conservation						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence						.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		L	F	C	S	G	P	V	S	S	A	T	F	L	E	S	C	G	V	A	D	L	I	T	T	C	Y	G	G	R	N	R	K	V	A	E	A	F	A	R	T	G	K	S	I	E	Q	L	E	K	E	L	L	N	G	Q	K	L	Q	G	P	E	T	A	R	E	L	Y	S	I	L	Q	H	K	G	L	V	D	K	F	P
Template Known Secondary structure				S	S	S				G	G	G	G	G	S	T	T	T																																			S	T	T																		T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G	S	Q	L	D	H	S	A	L	V	Q	A	L	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		L	F	M	A	V	Y	K	V	C	.	.	.	.	.	.	.	Y	E	G	Q	P	V	G	E	F	I	H	C	L	Q
Template Known Secondary structure											.	.	.	.	.	.	.		T				G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions