Return to main results Retrieve Phyre Job Id

Job DescriptionP77161
Confidence98.05%DateThu Jan 5 12:25:47 GMT 2012
Rank287Aligned Residues92
% Identity17%Templatec1sevA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:malate dehydrogenase, glyoxysomal precursor; PDBTitle: mature and translocatable forms of glyoxysomal malate2 dehydrogenase have different activities and stabilities3 but similar crystal structures
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1...... ..10.........20.... .....30.........40 .........50.........60......
Predicted Secondary structure 

.




..

..........











.
Query SS confidence 






.
















. .















. . . . . . . . . .

























.
Query Sequence  MKLGFIG. LGIMGTPMAINLARAGH. . QLHVTTIGPVADELLS. . . . . . . . . . LGAVSVETARQVTEASDIIFIMVPDT.
Query Conservation 


 


. 
 

  

  
   
 .. 
   

         .......... 
     
  

    
 

  
   .
Alig confidence 






.
















..















..........

























.
Template Conservation 


 



 
 

   
  
       

 
 
         

                     
  








   
Template Sequence  FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPR
Template Known Secondary structure  TTTSTTT
TTSSST

SS
STT
S





Template Predicted Secondary structure 
































Template SS confidence 















































































   45....50.........60.........70.........80.........90.........100.........110.........120....
 
   67..70.........80.........90..
Predicted Secondary structure  ...........






Query SS confidence  . . . . . . . . . . .

























Query Sequence  . . . . . . . . . . . PQVEEVLFGENGCTKASLKGKTIVDM
Query Conservation  ...........                      

  
Alig confidence  ...........

























Template Conservation       
 


  
  
   

  
       
 



Template Sequence  KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS
Template Known Secondary structure 
TT

SSS
TTS

Template Predicted Secondary structure 










Template SS confidence 




































   125....130.........140.........150.........160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions