Job Description P77161 Confidence 97.60% Date Thu Jan 5 12:25:47 GMT 2012 Rank 349 Aligned Residues 140 % Identity 13% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.												.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	.	.	.	.	.	.	.	.	.	.	.	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																				.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																								.																																																							.
Template Sequence		N	I	V	I	Y	G	A	G	G	A	A	R	A	V	A	F	E	L	A	K	D	N	.	N	I	I	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E	I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	G	V	D	I	I	I	N	A	T	P	I	G	M	.	Y	P
Template Known Secondary structure									S											T	S	S	S	.							S	S																T												T	T				T	T								S		T	T		.	T	T
Template Predicted Secondary structure																								.																																																							.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	F	G	E	N	G	C	T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G	D	E	A	V	F	E	R	V
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		N	I	D	V	E	P	I	V	K	A	E	K	L	R	E	D	M	V	V	M	D	L	I	Y	N	P	L	E	T	V	.	.	L	L	K	E	A	K	K	V	N	A	K	T	I	N	G	L	G	M	L	I	Y	Q	G	A	V	A	F	K	I	W	T	G	V	E	P	N	I	E	V	M	K	N	A
Template Known Secondary structure				S	S			S	S		S	T	T			S	S	S								S	S	S	S			.	.							T	T	T						T																	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions