Job Description P77161 Confidence 99.83% Date Thu Jan 5 12:25:47 GMT 2012 Rank 70 Aligned Residues 275 % Identity 17% Template c1np3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: crystal structure of class i acetohydroxy acid isomeroreductase from2 pseudomonas aeruginosa Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		M	K	L	G	F	I	G	L	G	I	M	G	T	P	M	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	.	D	E	L	L	S	L	G	A	V	S	V	E	T	A	R	Q	V	T	E	A	S	D	I	I	F	I	M	V	P	D	T	P	Q	V	E	E	V	L	F	G	E	N	G	C
Query Conservation																																					.
Alig confidence																																					.																																								.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		K	K	V	A	I	I	G	Y	G	S	Q	G	H	A	H	A	C	N	L	K	D	S	G	V	D	V	T	V	G	L	R	S	G	S	A	T	V	A	K	A	E	A	H	G	L	K	V	A	D	V	K	T	A	V	A	A	A	D	V	V	M	I	L	T	P	D	E	F	Q	G	R	L	Y	K	E	.	.	.	E	I
Template Known Secondary structure		S						S		S												T	T	T									T	T		T	T							T	T												T		S						S												.	.	.		T
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	A	S	L	K	G	K	T	I	V	D	M	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	P	I	E	T	K	R	F	A	R	Q	V	N	E	L	G	G	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	M	V	G	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	N	L	K	K	G	A	T	L	A	F	A	H	G	F	S	I	H	Y	N	Q	V	V	P	R	A	D	L	D	V	I	M	I	A	P	K	A	P	G	H	T	V	R	S	E	F	V	K	G	G	G	I	P	D	L	I	A	I	Y	Q	D	A	S	G	N	A	K	N	V	A	L	S	Y	A	C	G	V	G	G
Template Known Secondary structure		G	G	G			T	T						S	S						T	T	S					T	T	S								S	S		S								T	T	T													S	S	S													T	T	G
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		138	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		D	E	.	.	.	.	A	V	F	E	R	V	K	P	L	F	E	L	L	G	K	N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	L	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	M	G	G	F	A	S	S	R	I
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		G	R	T	G	I	I	E	T	T	F	K	D	E	T	E	T	D	L	F	G	E	Q	A	V	L	C	G	G	C	V	E	L	V	K	A	G	F	E	T	L	V	E	A	G	Y	A	P	E	M	A	Y	F	E	C	L	H	E	L	K	L	I	V	D	L	M	Y	E	G	G	I	A	N	M	N	Y	S	I	S	N	N
Template Known Secondary structure		G	G	T																					T	T	T																	T	T											T	T	T																				S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																	.	.												.	.	.
Query SS confidence																	.	.												.	.	.
Query Sequence		L	E	V	H	G	E	R	M	I	K	R	T	F	N	P	.	.	G	F	K	I	A	L	H	Q	K	D	L	.	.	.	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G	S	Q	L	D	H	S	A	L	V	Q	A	L	E	L	M
Query Conservation																	.	.												.	.	.
Alig confidence																	.	.												.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		A	E	Y	G	E	Y	V	T	G	P	E	V	I	N	A	E	S	R	A	A	M	R	N	A	L	K	R	I	Q	D	G	E	Y	A	K	M	F	I	T	E	G	A	A	N	Y	P	S	M	T	A	Y	R	R	N	.	.	.	.	.	.	.	.	N	A	A	H	P	I	E	Q	I	G	E	K	L	R	A	M
Template Known Secondary structure														S																	T	T												T	T	S										.	.	.	.	.	.	.	.			T	S												T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions