Job Description P76397 Confidence 99.87% Date Thu Jan 5 12:22:38 GMT 2012 Rank 4 Aligned Residues 223 % Identity 26% Template c1t5eB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:multidrug resistance protein mexa; PDBTitle: the structure of mexa Resolution 3.00 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	G	T	I	T	A	A	N	T	V	T	V	R	S	R	V	D	G	Q	L	I	A	L	H	F	Q	E	G	Q	Q	V	K	A	G	D	L	L	A	E	I	D	P	S	Q	F	K	V	A	L	A	Q	A	Q	G	Q	L	A	K	D	K	A	T	L	A	N	A	R	R	D	L	A	R	Y	Q	Q	L	A	K
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	L	P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	K	L	L	V	A	D	Q	A	.	.	.	.
Template Known Secondary structure										S								S	S									S		T	T					T	T																																						T			.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	L	V	S	R	Q	E	L	D	A	Q	Q	A	L	V	S	E	T	E	G	T	I	K	A	D	E	A	S	V	A	S	A	Q	L	Q	L	D	W	S	R	I	T	A	P	V	D	G	R	V	G	L	K	Q	V	D	V	G	N	Q	I	S	S	G	D	T	T	G	I	V	V	I	T	Q	T	H	P	I	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S																												T	T					S	S	S							S	S		T	T					T	T		S	S		S							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		V	F	T	L	P	E	S	D	I	A	T	V	V	Q	A	Q	K	A	G	.	.	.	.	.	.	.	K	P	L	V	V	E	A	W	D	R	T	N	S	K	K	L	S	E	G	T	L	L	S	L	D	N	Q	I	D	A	T	T	G	T	I	K	V	K	A	R	F	N	N	Q	D	D	A	L	F	P	N	Q	F	V
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A	A	K	V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	T	G	S	V	T	I	R	A	V	F	P	N	P	N	N	E	L	L	P	G	M	F	V
Template Known Secondary structure																			T	T		S					T	T									T	T	S												S						T	T	T	T											G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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