Job Description P76397 Confidence 57.21% Date Thu Jan 5 12:22:38 GMT 2012 Rank 64 Aligned Residues 54 % Identity 19% Template c1q90A_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:apocytochrome f; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii Resolution 3.10 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	H	F	Q	E	G	Q	Q	V	K	A	G	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	D	P	S	Q	F	K	V	A	L	A	Q	A	Q	G	Q	L	A	K	D	K	A	T	L	A	N	A	R	R	D	L	A	R	Y	Q	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	I	V	K	E	G	Q	T	V	Q	A	D	Q	P	L	T	N	N	P	N	V	G	G	F	G	Q	A	E	T	E	I	V	L	Q	N	P	A	R	I	Q	G	L	L	V	F	F	S	F	V	L	L	T	Q	V	L	L	V	L	K	K	K	Q	F	E	K	V	Q	L
Template Known Secondary structure			B				T	T					T	T		B	S	B
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions