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Job DescriptionP75809
Confidence98.48%DateThu Jan 5 12:14:26 GMT 2012
Rank103Aligned Residues203
% Identity12%Templatec3s6jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the crystal structure of a hydrolase from pseudomonas syringae
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  LIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGEL
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Template Sequence  SFIFDLDGTLTDSVYQN. VAAWKEALDAE. . . . . . . . . . . NIPLAXWRIHRKIGXSGGL. . . . . . . . . . . . . . . XTGXSI
Template Known Secondary structure 

BTTT
.T...........T



TTTTS
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   109110.........120..... ....130...... ...140.........150..... ....160.
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  SKDAFATVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKA
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Template Sequence  TDEQAERLSEKHAQ. . . . . . . . . . . . . . . . . . . . . . AYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL
Template Known Secondary structure 
......................TTGGG

TTTT


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   169170.........180.. .......190.........200.........210.........220......
 
   165....170.........180.........190.........200.........210.........220.........230. ........240
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Query Sequence  LHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFA. . . . MENAGSAVV
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Template Sequence  KALKLDINKINI. . . . VTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDXLAARRCKATGVGLLSGGYDIGELE
Template Known Secondary structure  TT

GGGS
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GGGSSS
TTSSTT

GGGSSTT
GGGS

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   227..230........ .240.........250.........260.........270.........280.........290.........300..
 
   241. .......250.........260..
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Query Sequence  AA. AKYRAGSNNREGVLDVIDKV
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Template Sequence  RAGALRVYEDPLD. . LLNHLDEI
Template Known Secondary structure  TT
SSS..TTGGGT
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   303......310..... ....320...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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