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Job DescriptionP75809
Confidence98.81%DateThu Jan 5 12:14:26 GMT 2012
Rank86Aligned Residues228
% Identity12%Templatec3qnmA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVF
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Template Sequence  LKYKNLFFDLDDTIWAF. . . . SRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEY. . . . . . . . . . . . . . . GE
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BTTTB
....TTGGGTSSS...............T
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   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  NGELSKDAFATVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
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Template Sequence  GKVTKEELNRQRFFYPLQAVGVE. . . . . . DEALAERFSEDFFAIIPTKSGLXPHAKEVLEYLAPQYNLYILSNGFRELQS
Template Known Secondary structure  TSS
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Query Sequence  VQKALHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGG. NDIEMLRQAGF. SFAMENAGSA
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Template Sequence  RKXRSAGVDRYFKKIILSEDL. . . . . GVLKPRPEIFHFALSATQSELRESLXIGDSWEADITGAHGVGXHQAFYNVTERT
Template Known Secondary structure  T
GGG
SGGGT.....T

TTSTT

GGGS
TTTTTT


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   136...140.........150...... ...160.........170.........180.........190.........200.........210
 
   239240. ........250.........260
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Query Sequence  VVA. AAKYRAGSNNREGVLDVID
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Template Sequence  VFPFQPTYHIHSLKE. . LXNLLE
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SSST..T
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   211........220..... ....230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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