 |
Job Description | P75809 | Confidence | 95.09% | Date | Thu Jan 5 12:14:26 GMT 2012 |
Rank | 147 | Aligned Residues | 67 |
% Identity | 15% | Template | c2i6xA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; |
PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis.
|
Resolution | 2.40 Å |
|
 |
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | I | I | P | G | V | H | K | A | N | G | L | R | Q | L | Q | K | L | W | G | I | D | D | S | E | V | V | V | F | G | D | G | G | N | D | I | E | M | L | R | Q | A | G | F | S | F | A | M | E | N | A | G | S | A | V | V | A | A | A | K | Y | R | A | G | S | N | N | R | E | G | V | L | D | V | I | D | K | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
C | Q | X | G | K | Y | K | P | N | E | D | I | F | L | E | X | I | A | D | S | G | X | K | P | E | E | T | L | F | I | D | D | G | P | A | N | V | A | T | A | E | R | L | G | F | H | T | Y | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | N | G | E | N | W | I | P | A | I | T | R | L | L |
Template Known Secondary structure |   |
 |  |  | T |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
264 | . | . |
Predicted Secondary structure |   |
 |  |
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
K | H | E |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
R | E | Q |
Template Known Secondary structure |   |
T |
|
|
Template Predicted Secondary structure |   |
 |
|
|
Template SS confidence |   |
|
|
|
  |   |
205 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|