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Job DescriptionP75809
Confidence98.16%DateThu Jan 5 12:14:26 GMT 2012
Rank119Aligned Residues219
% Identity18%Templatec2hoqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative had-hydrolase ph1655; PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVF
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Template Sequence  MV. KVIFFDLDDTLVDTSKLA. EIARKNAIENMIRHGLPV. . DFETAYSELIELIKEYGSNFP. . . . . . . . . . . . . . . . .
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SBTTTB
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   1. .......10.........20 .........30........ .40.........50.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  NGELSKDAFATVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
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Template Sequence  . . . . . . . . . . YHFDYLLRRLDL. . . . . PYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQ
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   161........170.........180.........190.........200.........210....... ..220........ .230.......
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Query Sequence  VQKALHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGG. NDIEMLRQAGF. SFAMENAGS.
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Template Sequence  WEKILRLELDDFFEHVIISDFEGVKKPHP. . . . KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHS
Template Known Secondary structure  TT
GGG
SGGGGT

TT
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GGGS
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   125....130.........140.........150... ......160.........170.........180.........190.........200
 
   238.240.........250.........260.
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Query Sequence  . . . . AVVAAAKYRAGSNNREGVLDVIDK
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Template Sequence  ERELEYRKYADYEIDNLES. . LLEVLAR
Template Known Secondary structure  TTGGG
SSSTT..
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   201........210......... 220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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