Job Description P39328 Confidence 1.33% Date Thu Jan 5 11:59:22 GMT 2012 Rank 73 Aligned Residues 155 % Identity 9% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	T	T	T	P	K	R	R	F	R	W	P	T	G	M	P	Q	L	V	A	L	L	L	V	L	L	V	D	S	L	V	A	P	H	F	W	Q	V	V	L	Q	D	G	R	L	F	G	S	P	I	D	I	L	N	R	A	A	P	V	A	L	L	A	I	G	M	T	L	V	I	A	T	G	G	I	D	L	S	V
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	P	M	L	G	G	I	G	Q	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	.	.	.	.
Template Known Secondary structure			S																										G	G	G	G	G	G		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T														.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.																.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		G	A	V	M	A	I	A	G	A	T	T	A	A	M	T	V	A	G	F	S	L	P	I	V	L	L	S	A	L	G	T	G	I	L	A	G	L	W	N	G	I	L	V	A	I	L	K	.	I	Q	P	F	V	A	T	L	I	L	M	V	A	G	R	G	V	A	Q	L	I	T	A	G	Q	I	V	T	F	N	S	P
Query Conservation																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	K	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																							S	S																													S	S	S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	S	W	F	G	S	G	S	L	L	F	L	P	T	P	V	I	I	A	V	L	T	L	I	L	F	W	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	T	S	S	M	F	V	T	D	R	S	F	N	I	A	A	Y	G	I	M	I	V	L	A	V	L	Y	T	L	F
Template Known Secondary structure					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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