Job Description P39328 Confidence 3.32% Date Thu Jan 5 11:59:22 GMT 2012 Rank 17 Aligned Residues 100 % Identity 13% Template c2ksfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein kdpd; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	L	S	G	L	C	A	A	I	A	G	I	I	V	A	A	D	I	R	G	A	D	A	N	N	A	G	L	W	L	E	L	D	A	I	L	A	V	V	I	G	G	G	S	L	M	G	G	R	F	N	L	L	L	S	V	V	G	A	L	I	I	Q	G	M	N	T	G	I	L	L	S	G	F	P	P	E	M	N
Query Conservation
Alig confidence																																															.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		S	V	V	A	A	A	L	S	A	V	I	T	L	I	A	M	Q	W	L	M	A	F	D	A	A	N	L	V	M	L	Y	L	L	G	V	V	V	V	A	L	F	Y	G	R	W	.	.	.	.	.	P	S	V	V	A	T	V	I	N	V	V	S	F	D	L	F	F	I	A	P	R	G	T	L	A	V	S	D	V	Q
Template Known Secondary structure																					S	T	T	S	S			S	S															S	S		.	.	.	.	.			S													T	T	S		S	S		T	T		S	S
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.						.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	V	K	A	V	V	V	L	C	V	L	I	V	Q	S	Q	R	F	I	S	L	I	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	L	T	F	A	V	M	L	T	V	G	L	V	I	G	N	L	T	A	G	V	R	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions