Job Description P0AG44 Confidence 100.00% Date Thu Jan 5 11:28:06 GMT 2012 Rank 2 Aligned Residues 116 % Identity 45% Template c3bboP_ PDB info PDB header:ribosome Chain: P: PDB Molecule:ribosomal protein l17; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome Resolution 9.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	H	R	K	S	G	R	Q	L	N	R	N	S	S	H	R	Q	A	M	F	R	N	M	A	G	S	L	V	R	H	E	I	I	K	T	T	L	P	K	A	K	E	L	R	R	V	V	E	P	L	I	T	L	A	K	T	D	S	V	A	N	R	R	L	A	F	A	R	T	R	D	N	E	I	V	A	K	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	H	G	R	K	V	P	K	L	N	R	P	P	D	Q	R	R	A	L	L	R	G	L	T	T	Q	L	L	K	H	G	R	I	K	T	T	K	A	R	A	R	A	V	R	K	Y	V	D	K	M	I	T	M	A	K	D	G	S	L	H	K	R	R	Q	A	L	G	F	I	Y	E	K	Q	I	V	H	A	L	F
Template Known Secondary structure				T	T			S			T	T	S		G	G	G															T	S																											T	T								T	T				T	T						T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	L	G	P	R	F	A	S	R	A	G	G	Y	T	R	I	L	K	C	G	F	R	A	G	D	N	A	P	M	A	Y	I	E	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	V	P	D	R	Y	G	E	R	N	G	G	Y	T	R	I	I	R	T	L	P	R	R	G	D	N	A	P	M	A	Y	I	E	L	V
Template Known Secondary structure		T	S	S	G	G	G	G	S	S			S							B		S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions