Job Description P76042 Confidence 99.96% Date Thu Jan 5 12:17:42 GMT 2012 Rank 63 Aligned Residues 281 % Identity 15% Template d1y9ua_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.39

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	F	M	H	S	S	V	E	Q	E	R	Q	A	V	I	S	K	L	I	A	R	F	E	K	E	N	P	G	I	T	V	K	Q	V	P	V	E	E	D	A	Y	N	T	K	V	I	T	L	S	R	S	G	S	L	P	E	V	I	E	T	S	H	D	Y	A	K	V	M	D	K	E	Q	L	I	D	R	K	A
Query Conservation
Alig confidence												.	.	.	.															.											.
Template Conservation												.	.	.	.															.											.
Template Sequence		E	V	S	L	Y	T	T	R	E	P	.	.	.	.	K	L	I	Q	P	L	L	D	A	F	A	K	D	S	.	G	I	K	V	N	T	V	F	V	K	.	D	G	L	L	E	R	V	R	A	E	G	D	K	S	P	A	D	V	L	M	T	V	D	I	G	N	L	I	D	L	V	N	G	G	V	T	Q	K	I	Q
Template Known Secondary structure								S	S		G	.	.	.	.	G	G	T												.										S	.	S										G	G	G										S										T	T
Template Predicted Secondary structure												.	.	.	.															.											.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	V	I	S	N	V	G	E	G	A	F	Y	D	G	V	L	R	I	V	R	T	E	D	G	S	A	W	T	G	V	P	V	S	A	W	I	G	G	I	W	Y	R	K	D	V	L	A	K	A	G	L	E	E	P	K	N	W	Q	Q	L	L	D	V	A	Q	K	L	N	D	P	A	N	K	K	Y	G	I	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		S	Q	T	L	D	S	V	V	P	A	N	L	R	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	G	S	W	Y	A	L	S	L	R	D	R	V	L	Y	V	E	K	D	L	K	L	D	.	.	.	.	.	S	F	R	Y	G	D	L	A	D	P	K	W	K	.	.	.	.	.	.	.	.	G	K	V	C
Template Known Secondary structure									S		G	G	G	B	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S															T	T					.	.	.	.	.			B	G	G	G	G	G		G	G	G	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	P	T	A	E	S	V	L	T	E	Q	S	F	S	Q	F	A	L	S	N	Q	A	N	V	F	N	A	E	G	K	I	T	L	D	T	P	E	M	M	Q	A	L	T	Y	Y	R	D	L	T	A	N	T	M	P	G	S	N	.	D	I	M	E	V	K	D	A	F	M	N	G	T	A	P	M	A	I	Y	S	T	Y
Query Conservation																																																											.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	S	G	Q	H	P	Y	N	T	A	L	V	A	A	M	I	A	H	D	G	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	E	K	W	L	R	G	V	K	A	N	L	A	R	K	A	A	G	G	D	R	D	V	A	R	D	I	L	G	G	I	C	D	I	G	L	A	N	A	Y
Template Known Secondary structure					T	T	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													B	S	S		S		S											T	T	S		S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		I	L	P	A	V	I	K	E	G	D	P	K	N	V	.	.	.	.	G	F	V	V	P	T	E	K	N	S	A	V	Y	G	M	L	T	S	L	T	I	T	A	G	Q	K	T	E	E	T	E	A	A	E	K	F	V	T	F	M	E	Q	A	D	N	I	A	D	W	V	M	M	S	P	G	A	A	L	P	V	N	K
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																																																						.	.
Template Conservation																																																																									.	.
Template Sequence		Y	V	G	H	M	K	N	A	E	P	G	T	D	A	R	K	W	G	D	A	I	K	V	V	R	P	T	F	A	G	G	T	H	V	N	I	S	G	A	A	V	A	A	H	A	P	N	K	A	N	A	V	K	L	L	E	Y	L	V	S	E	P	A	Q	T	L	Y	A	Q	A	N	.	.	Y	E	Y	P	V	R	A
Template Known Secondary structure									S		T	T	S								T							B					B											T	T		T	T												T	S											T	.	.	T				S	S	T
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	T	T	A	T	W	K	D	N	D	V	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	K	L	D	A	V	V	A	S	F	G	P	L	K
Template Known Secondary structure		T										T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions