Job Description P76042 Confidence 99.96% Date Thu Jan 5 12:17:42 GMT 2012 Rank 61 Aligned Residues 277 % Identity 13% Template d1q35a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	F	M	H	S	S	V	E	Q	E	R	Q	A	V	I	S	K	L	I	A	R	F	E	K	E	N	P	G	I	T	V	K	Q	V	P	V	E	E	D	A	Y	N	T	K	V	I	T	L	S	R	S	G	S	L	P	E	V	I	E	T	S	H	D	Y	A	K	V	M	D	K	E	Q	L	I	D	R	K	A
Query Conservation
Alig confidence											.	.	.	.																.								.	.
Template Conservation											.	.	.	.																.								.	.
Template Sequence		E	V	N	V	Y	S	Y	R	Q	.	.	.	.	P	Y	L	I	E	P	M	L	K	N	F	E	K	D	T	.	G	I	K	V	N	I	I	.	.	F	A	D	G	L	V	D	R	V	K	Q	E	G	E	L	S	P	A	D	V	L	L	T	V	D	I	S	R	V	M	E	I	V	N	A	D	L	A	Q	K	I	D
Template Known Secondary structure								S	S		.	.	.	.	G	G	G	T												.								.	.													G	G	G									S											T	T		B
Template Predicted Secondary structure											.	.	.	.																.								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	V	I	S	N	V	G	E	G	A	F	Y	D	G	V	L	R	I	V	R	T	E	D	G	S	A	W	T	G	V	P	V	S	A	W	I	G	G	I	W	Y	R	K	D	V	L	A	K	A	G	L	E	E	P	K	N	W	Q	Q	L	L	D	V	A	Q	K	L	N	D	P	A	N	K	K	Y	G	I	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.																	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	K	V	L	E	K	N	I	P	A	Q	F	R	D	S	N	D	.	.	Q	W	F	G	L	T	T	R	A	R	V	I	Y	T	S	K	D	R	V	G	K	L	P	A	G	F	D	Y	L	D	L	.	.	.	.	.	.	.	.	.	.	A	K	P	E	Y	K	G	K	V	C
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.							S		G	G	G	B		T	T	S	.	.	S															T	T	T	T		S			T	T			G	G	G	G	.	.	.	.	.	.	.	.	.	.	G	S	G	G	G	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77											.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	P	T	A	E	S	V	L	T	E	Q	S	F	S	Q	F	A	L	S	N	Q	A	N	V	F	N	A	E	G	K	I	T	L	D	T	P	E	M	M	Q	A	L	T	Y	Y	R	D	L	T	A	N	T	M	P	G	S	N	.	D	I	M	E	V	K	D	A	F	M	N	G	T	A	P	M	A	I	Y	S	T	Y
Query Conservation																																																											.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	S	G	K	N	S	Y	N	V	S	L	F	A	A	M	I	E	H	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	K	T	K	A	F	L	E	G	L	K	A	N	L	A	R	K	P	Q	G	G	D	R	D	Q	V	K	A	I	K	E	G	I	C	D	Y	S	I	G	N	S	Y
Template Known Secondary structure			S		T	T	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	B	S	S				S												T	S		S						T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		I	L	P	A	V	I	K	E	G	D	P	.	K	N	V	G	F	V	V	P	T	E	K	N	S	A	V	Y	G	M	L	T	S	L	T	I	T	A	G	Q	K	T	E	E	T	E	A	A	E	K	F	V	T	F	M	E	Q	A	D	N	I	A	D	W	V	M	M	S	P	G	A	A	L	P	V	N	K	A	V	V
Query Conservation													.
Alig confidence													.																																																									.	.
Template Conservation																																																																						.	.
Template Sequence		Y	Y	G	K	M	L	D	D	E	K	Q	K	S	W	A	E	A	A	I	I	N	F	P	S	G	E	H	G	T	H	K	N	I	S	G	V	V	I	A	K	H	S	P	N	K	A	N	A	V	K	L	I	E	Y	L	S	G	E	K	A	Q	G	L	Y	A	E	L	N	.	.	H	E	Y	P	V	K	E	G	I	E
Template Known Secondary structure									S	T	T	T						T								S	T	T		B										B	T	T		T	T													S												.	.					S	S	T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.
		348	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	A	T	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	A	I	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions