Job Description P76042 Confidence 100.00% Date Thu Jan 5 12:17:42 GMT 2012 Rank 43 Aligned Residues 409 % Identity 11% Template d1j1na_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.60

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.
Predicted Secondary structure																																																	.																										.	.
Query SS confidence																																																	.																										.	.
Query Sequence		C	K	E	E	N	K	T	N	V	S	I	E	F	M	H	S	S	V	E	Q	E	R	Q	A	V	I	S	K	L	I	A	R	F	E	K	E	N	P	G	I	T	V	K	Q	V	P	V	.	E	E	D	A	Y	N	T	K	V	I	T	L	S	R	S	G	S	L	P	E	V	I	E	T	S	.	.	H	D	Y	A	K
Query Conservation																																																	.																										.	.
Alig confidence																																							.										.																										.	.
Template Conservation																																							.
Template Sequence		A	T	W	V	T	D	K	P	L	T	L	K	I	H	M	H	F	R	D	K	W	V	W	D	E	N	W	P	V	A	K	E	S	F	R	L	T	.	N	V	K	L	Q	S	V	A	N	K	A	A	T	N	S	Q	E	Q	F	N	L	M	M	A	S	G	D	L	P	D	V	V	G	G	D	N	L	K	D	K	F	I
Template Known Secondary structure		T	T		S		S	S											T	T	T					T	T	S											.	S							S		T	T													T	S	S				S					S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																							.	.	.	.																							.
Query SS confidence																							.	.	.	.																							.
Query Sequence		V	M	D	K	E	Q	L	I	D	R	K	A	V	A	T	V	I	S	N	V	G	.	.	.	.	E	G	A	F	Y	D	G	V	L	R	I	V	R	T	E	D	G	S	A	W	T	G	.	V	P	V	S	A	W	I	G	G	I	W	Y	R	K	D	V	L	A	K	A	G	L	E	E	P	K	N	W	Q	Q	L	L
Query Conservation																							.	.	.	.																							.
Alig confidence																							.	.	.	.																							.
Template Conservation
Template Sequence		Q	Y	G	Q	E	G	A	F	V	P	L	N	K	L	I	D	Q	Y	A	P	H	I	K	A	F	F	K	S	H	P	E	V	E	R	A	I	K	A	P	D	G	N	I	Y	F	I	P	Y	V	P	D	G	V	V	A	R	G	Y	F	I	R	E	D	W	L	K	K	L	N	L	K	P	P	Q	N	I	D	E	L	Y
Template Known Secondary structure						T	T	S	B																															T	T	S												S															T	T						B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.										210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.											.	.
Query Sequence		D	V	A	Q	K	L	N	D	P	A	N	K	K	Y	G	I	A	L	P	T	A	E	S	V	L	T	E	Q	S	F	S	Q	F	A	L	S	N	.	.	.	.	.	.	.	.	.	Q	A	N	V	F	N	A	E	G	K	.	.	I	T	L	D	T	P	E	M	M	Q	A	L	T	Y	Y	R	D	L	T	A	N	T
Query Conservation																																							.	.	.	.	.	.	.	.	.											.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		T	V	L	K	A	F	K	E	K	D	P	N	G	N	G	K	A	D	E	V	P	F	I	D	R	H	P	D	E	V	F	R	L	V	N	F	W	G	A	R	S	S	G	S	D	N	Y	M	D	F	Y	I	D	N	G	R	V	K	H	P	W	A	E	T	A	F	R	D	G	M	K	H	V	A	Q	W	Y	K	E	G
Template Known Secondary structure										S		T	T		S	S	S									S	S	T	T					G	G	G	G	G	T			S		S	S	S	S	T	T						T	T					G	G	G	S																T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		242	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																																.	.	.	.																.	.	.	.	.	.
Query SS confidence						.	.	.	.																																.	.	.	.																.	.	.	.	.	.
Query Sequence		M	P	G	S	.	.	.	.	N	D	I	M	E	V	K	D	A	F	M	N	G	T	A	P	M	A	I	Y	S	T	Y	I	L	P	A	V	I	K	E	.	.	.	.	G	D	P	K	N	V	G	F	V	V	P	T	E	K	N	.	.	.	.	.	.	S	A	V	Y	G	M	L	T	S	L	T	I	T	A	G	Q
Query Conservation						.	.	.	.																																.	.	.	.																.	.	.	.	.	.
Alig confidence						.	.	.	.																																.	.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	D	K	E	I	F	T	R	K	A	K	A	R	E	Q	M	F	G	G	N	L	G	G	F	T	H	D	W	F	A	S	T	M	T	F	N	E	G	L	A	K	T	V	P	G	F	K	L	I	P	I	A	P	P	T	N	S	K	G	Q	R	W	E	E	D	S	R	Q	K	V	R	P	D	G	W	A	I	T	V
Template Known Secondary structure			B		T	T	T	T	T		G	G	G								T	T														T					T	T	T	T	S	T	T										B		T	T	S				B						S	S		S						B	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.																														.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	E	E	T	E	A	A	E	K	F	V	T	F	M	E	Q	A	D	N	I	A	D	W	V	M	M	S	P	G	A	A	L	P	V	N	K	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	T	A	T	W	K	D	N	D	V	I
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	K	N	P	V	E	T	I	K	F	F	D	F	Y	F	S	R	P	G	R	D	I	S	N	F	G	V	P	G	V	T	Y	D	I	K	N	G	K	A	V	F	K	D	S	V	L	K	S	P	Q	P	V	N	N	Q	L	Y	D	M	G	A	Q	I	P	I	G	F	W	Q	D	Y	D	Y	E	R	Q	W	T	T
Template Known Secondary structure		T		S												T	T	S												B	T	T	T					T	T												S	S								T	T	T		S		S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.						.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																																	.	.	.	.	.
Query SS confidence																																		.	.	.	.																																	.	.	.	.	.
Query Sequence		K	A	L	G	E	L	P	N	Q	L	I	G	E	L	P	N	I	Q	V	F	G	A	V	G	D	K	N	F	T	R	M	G	.	.	.	.	D	V	T	G	S	G	V	V	S	S	M	V	H	N	V	T	V	G	K	A	D	L	S	T	T	L	Q	A	S	Q	K	K	.	.	.	.	.	L	D	E	L	I	E	Q
Query Conservation																																		.	.	.	.																																	.	.	.	.	.
Alig confidence																																		.	.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	Q	A	G	I	D	M	Y	V	K	G	K	Y	V	M	P	G	F	E	G	V	N	M	T	R	E	E	R	A	I	Y	D	K	Y	W	A	D	V	R	T	Y	M	Y	E	M	G	Q	A	W	V	M	G	T	K	D	V	D	K	T	W	D	E	Y	Q	R	Q	L	K	L	R	G	L	Y	Q	V	L	Q	M
Template Known Secondary structure															T		B																																						T	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		430
Predicted Secondary structure
Query SS confidence
Query Sequence		H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		482