Job Description P76042 Confidence 57.59% Date Thu Jan 5 12:17:42 GMT 2012 Rank 98 Aligned Residues 77 % Identity 13% Template c3k2dA_ PDB info PDB header:immune system Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus Resolution 2.60 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	E	N	K	T	N	V	S	I	E	F	M	H	S	S	V	E	Q	E	R	Q	A	V	I	S	K	L	I	A	R	F	E	K	E	N	P	G	I	T	V	K	Q	V	P	V	E	E	D	A	Y	N	T	K	V	I	T	L	S	R	S	G	S	L	P	E	V	I	E	T	S	H	D	Y	A	K	V	M	D	K
Query Conservation
Alig confidence															.	.	.	.																				.													.	.	.
Template Conservation															.	.	.	.																				.													.	.	.
Template Sequence		G	H	M	D	T	S	K	V	K	V	G	V	M	.	.	.	.	A	G	A	E	A	Q	V	A	E	V	A	A	K	V	A	K	E	K	Y	.	G	L	D	V	E	L	V	T	F	T	D	Y	.	.	.	V	T	P	N	A	A	L	D	D	G	S	I	D	M	N	A	F	Q	H	K	P	Y	L	D	R	Q	V	E
Template Known Secondary structure				S											.	.	.	.	T	T																		.										S		T	.	.	.	T	S								T	S		S
Template Predicted Secondary structure															.	.	.	.																				.													.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		102	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	D	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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