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Job DescriptionP76042
Confidence100.00%DateThu Jan 5 12:17:42 GMT 2012
Rank42Aligned Residues364
% Identity17%Templatec1svxB_
PDB info PDB header:de novo protein/sugar binding proteinChain: B: PDB Molecule:maltose-binding periplasmic protein; PDBTitle: crystal structure of a designed selected ankyrin repeat2 protein in complex with the maltose binding protein
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  VSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRK
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Template Sequence  GKLVIWIN. . GDKGYNGLAEVGKKFEKDT. GIKVTVE. . HPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEI
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..TTS
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STT
B


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   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  AVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGI
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Template Sequence  TPDKAF. . . . QDKLYPFTWDAVRYNGKL. . IAYPIAVEALSLIYNKDLLP. . . . NPPKTWEEIPALDKELKAKGKSALMF
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....TTB
TTSBSSS
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TTT
S....S

SBGGGTTT


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   80..... ....90.........100... ......110.........120... ......130.........140.........
 
   189190.........200.........210.........220.........230.........240...... ...250.........260.......
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Query Sequence  ALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSN. DIMEVKDAFMNGTAPMAIYST
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Template Sequence  NLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGP
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SSTT
TTSSSTTSS
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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  YILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVV
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Template Sequence  WAWSNIDTSKVNYG. VTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKD. . KPLGAVALKS
Template Known Secondary structure  GGT

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TT


BTT
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   230.........240... ......250.........260.........270.........280.........290...... ...300......
 
   348.350.........360.........370.........380.........390.........400.........410.........420....
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Query Sequence  TTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLD
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Template Sequence  YEEELAKDPRIAATMENAQK. . . . . . . . . . . . . . GEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTGSG
Template Known Secondary structure  TTS..............S


STTTTSS
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   307..310.........320...... ...330.........340.........350.........360.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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