Return to main results Retrieve Phyre Job Id

Job DescriptionQ1PI90
Confidence1.70%DateThu Jan 5 12:33:34 GMT 2012
Rank58Aligned Residues21
% Identity29%Templated1vcca_
SCOP infoDNA topoisomerase I domain DNA topoisomerase I domain Vaccinia DNA topoisomerase I, 9 kDa N-terminal fragment
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60....
Predicted Secondary structure 



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Query Sequence  TRVAFAGLKFQDVGSFDYGRN
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Template Sequence  TRLIFVGSDSKGRRQYFYGKM
Template Known Secondary structure  TS
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Template Predicted Secondary structure 






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   55....60.........70.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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