Job Description Q1PI90 Confidence 96.93% Date Thu Jan 5 12:33:34 GMT 2012 Rank 10 Aligned Residues 153 % Identity 11% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																.	.	.												.															.	.	.	.	.
Query SS confidence																																																.	.	.												.															.	.	.	.	.
Query Sequence		A	T	Y	R	N	T	D	F	F	G	L	V	D	G	L	N	F	A	V	Q	Y	Q	G	K	N	G	N	P	S	G	E	G	V	T	N	N	G	R	D	A	L	R	Q	N	G	D	.	.	.	G	V	G	G	S	I	T	Y	D	Y	E	.	G	F	G	I	G	G	A	I	S	S	S	K	R	T	.	.	.	.	.
Query Conservation																																																.	.	.												.															.	.	.	.	.
Alig confidence																																																.	.	.												.															.	.	.	.	.
Template Conservation
Template Sequence		L	T	Y	R	S	E	V	K	I	D	F	K	G	N	Y	S	S	D	L	N	R	A	F	N	N	Y	G	L	P	I	P	T	A	T	G	G	A	T	Q	S	G	Y	L	T	L	N	L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L
Template Known Secondary structure																				S		G	G	G	T	T	S			S	S					T	T																									T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
							171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure		.	.	.	.	.																													.																		.	.	.
Query SS confidence		.	.	.	.	.																													.																		.	.	.
Query Sequence		.	.	.	.	.	D	A	Q	N	T	A	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	.	I	Y	L	A	A	Q	Y	T	Q	T	Y	N	A	T	R	V	G	.	.	.	S	L	G	W	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S
Query Conservation		.	.	.	.	.																													.																		.	.	.
Alig confidence		.	.	.	.	.																													.																		.	.	.
Template Conservation
Template Sequence		K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S	P	V	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S	V	D
Template Known Secondary structure						T	T	S																									S	S	S													S	S		T	T	T			S	S	S																S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Y	L	Q	S	K	G	K	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	V	S	Y	M	H	G	Q	S	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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