Job Description Q1PI90 Confidence 86.67% Date Thu Jan 5 12:33:34 GMT 2012 Rank 20 Aligned Residues 109 % Identity 7% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.								.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		D	A	L	R	Q	N	G	D	G	V	G	G	S	I	T	Y	D	Y	E	G	F	G	I	G	G	A	I	S	S	S	K	R	T	D	A	Q	N	T	A	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	.	.	.	.	.	.	.	N	I	Y	L	A	A	Q	Y	T	Q	T	Y	N
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	.	.	.	.	.	.	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V
Template Known Secondary structure		S	S																	T	T													S	S	.	.	.	.	.	.			S	S																		S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		A	T	R	V	G	S	L	G	W	A	N	K	.	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	A	Y	L	Q	S	K	G	K	N	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		D	L	G	G	S	D	S	F	S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V
Template Known Secondary structure				T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions