Job Description Q1PI90 Confidence 100.00% Date Thu Jan 5 12:33:34 GMT 2012 Rank 1 Aligned Residues 251 % Identity 75% Template d1osma_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		D	G	D	Q	T	Y	M	R	L	G	F	K	G	E	T	Q	V	T	D	Q	L	T	G	Y	G	Q	W	E	Y	Q	I	Q	G	N	S	A	E	.	N	E	N	N	S	W	T	R	V	A	F	A	G	L	K	F	Q	D	V	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	V	T	S	W	T	D	V	L	P
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		D	G	D	Q	T	Y	M	R	L	G	V	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	Q	W	E	Y	N	V	Q	A	N	N	T	E	S	S	S	D	Q	A	W	T	R	L	A	F	A	G	L	K	F	G	D	A	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	V	T	S	W	T	D	V	L	P
Template Known Secondary structure																			S	S	S														S	S		T	T																	T	T	S											T	T					G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	G	G	D	T	Y	G	S	D	N	F	M	Q	Q	R	G	N	G	F	A	T	Y	R	N	T	D	F	F	G	L	V	D	G	L	N	F	A	V	Q	Y	Q	G	K	N	G	N	P	S	G	E	G	V	T	N	N	G	R	D	A	L	R	Q	N	G	D	G	V	G	G	S	I	T	Y	D	Y	E	G	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	G	G	D	T	Y	G	S	D	N	F	L	Q	S	R	A	N	G	V	A	T	Y	R	N	S	D	F	F	G	L	V	D	G	L	N	F	A	L	Q	Y	Q	G	K	N	G	S	V	S	G	E	G	A	T	N	N	G	R	G	A	L	K	Q	N	G	D	G	F	G	T	S	V	T	Y	D	I	F	D	G	I
Template Known Secondary structure		S	S				S	S		T	T	S	T	T	S	S											S	S	G	G	G	S	S	T	T											B			S	S	T	T	T			T	T				G	G	G		B		S												T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	A	I	S	S	S	K	R	T	D	A	Q	N	T	A	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	I	Y	L	A	A	Q	Y	T	Q	T	Y	N	A	T	R	V	G	S	L	G	W	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	G	F	A	Y	A	N	S	K	R	T	D	D	Q	N	Q	L	L	L	G	E	G	D	H	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	I	Y	L	A	T	Q	Y	T	Q	T	Y	N	A	T	R	A	G	S	L	G	F	A	N	K	A	Q	N	F	E	V	A	A	Q	Y	Q	F	D	F	G	L	R
Template Known Secondary structure																		T	S	S	B				S														T	T												S		S			T	T	T				S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	L	A	Y	L	Q	S	K	G	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	V	A	Y	L	Q	S	K	G	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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