Job Description Q1PI90 Confidence 1.97% Date Thu Jan 5 12:33:34 GMT 2012 Rank 52 Aligned Residues 86 % Identity 16% Template d1kmoa_ SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 2.00

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	I	G	G	A	I	S	S	S	K	R	T	D	A	Q	N	T	A	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	I	Y	L	A	A	Q	Y	T	Q	T	.	.	.	.	.	.	.	.	.	.	Y	N	A	T	R	V	G	S	L	G	W	A	N	K	A	Q	N	F	E
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	A	S	Y	A	Y	V	N	A	E	I	R	E	K	G	D	T	Y	G	N	L	V	P	F	S	P	K	H	K	G	T	L	G	V	D	Y	K	P	G	N	W	T	F	N	L	N	S	D	F	Q	S	S	Q	F	A	D	N	A	N	T	V	K	E	S	A	D	G	S	T	G	R	I	P	G	F	M	L	W	G
Template Known Secondary structure															S	S	S	T	T	T	T		B		T	T			S												T	T													B		S	S	T	T				S			T	T	S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
		228	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		A	V	A	Q	Y	Q	F	D	.	.	.	F	G	L	R	P	S	L	A
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		A	R	V	A	Y	D	F	G	P	Q	M	A	D	L	N	L	A	F	G
Template Known Secondary structure										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions