Job Description Q1PI90 Confidence 95.18% Date Thu Jan 5 12:33:34 GMT 2012 Rank 13 Aligned Residues 214 % Identity 15% Template c2y0lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.59 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	D	Q	L	T	G	Y	G	Q	W	E	Y	Q	I	Q	G	N	S	A	E	N	E	N	N	S	W	T	R	V	A	F	A	G	L	K	F	Q	D	V	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	V	T	S	W	T	D	V	L	P	E	F	G	G	D	T	Y	G	S	D	N	F	M	Q	Q	R	G
Query Conservation
Alig confidence																		.	.	.	.	.																			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	F	G	L	D	A	M	G	M	L	G	V	K	L	D	.	.	.	.	.	S	P	D	T	Y	S	K	L	G	L	T	A	K	V	K	V	S	Q	.	S	E	L	K	V	G	T	L	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	P	S	V	Q	P	N	N	G	R	I	F	P	Q	I
Template Known Secondary structure																		.	.	.	.	.																	T	T	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T	B					S	S	S	S
Template Predicted Secondary structure																		.	.	.	.	.																			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.															.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																												.																				.	.
Query SS confidence																																																												.																				.	.
Query Sequence		N	G	F	A	T	Y	R	N	T	D	F	F	G	L	V	D	G	L	N	F	A	V	Q	Y	Q	G	K	N	G	N	P	S	G	E	G	V	T	N	N	G	R	D	A	L	R	Q	N	G	D	G	V	G	G	S	I	T	Y	D	.	Y	E	G	F	G	I	G	G	A	I	S	S	S	K	R	T	D	A	Q	.	.
Query Conservation																																																												.																				.	.
Alig confidence																.	.																																											.																				.	.
Template Conservation																.	.
Template Sequence		F	E	G	A	L	L	T	S	K	E	I	K	D	L	.	.	G	F	T	A	G	R	L	E	K	T	K	I	D	S	E	D	L	A	L	N	D	K	N	G	R	F	A	G	V	S	A	D	H	F	D	L	G	G	L	D	Y	K	L	T	D	Q	L	T	A	S	Y	H	Y	S	N	L	Q	D	V	Y	R	Q	H	F
Template Known Secondary structure											S	S	T	T		.	.																		B	B			G	G	G	S	S				B		S												S	S	S											T	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
																										174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	A	Y	I	G	N	G	D	R	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	I	Y	L	A	A	Q	Y	T	Q	T	Y	N	A	T	R	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	L	L	H	S	W	P	I	G	P	G	E	L	T	S	D	L	R	F	A	R	S	T	D	S	G	S	A	K	A	G	G	I	D	N	K	S	L	N	G	M	F	T	Y	S	L	G	N	H	A	F	G	A	A	W	Q	R	M	N	G	D	D	A	F	P	Y	L	E	G	S	N	P	Y	L	V	N	F	V	Q
Template Known Secondary structure											S	S	S															T	T		T	T																	T	T												S	S	S					B	T	T						T	T			S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
			216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.																					.	.	.	.
Query SS confidence		.																					.	.	.	.
Query Sequence		.	S	L	G	W	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	.	.	.	.	F	G	L	R	P	S	L	A	Y	L	Q	S	K	G	K	N	L
Query Conservation		.																					.	.	.	.
Alig confidence		.																					.	.	.	.
Template Conservation
Template Sequence		V	N	D	F	A	G	P	K	E	R	S	W	Q	L	R	Y	D	Y	D	F	V	G	L	G	I	P	G	L	T	F	M	T	R	Y	V	K	G	D	N	V	E	L
Template Known Secondary structure		S					S	T	T												G	G	G	G	T		T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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