Return to main results Retrieve Phyre Job Id

Job DescriptionP16677
Confidence98.31%DateThu Jan 5 11:35:18 GMT 2012
Rank93Aligned Residues144
% Identity13%Templated1tf7a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  IHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLEN
Query Conservation 
  

   


 








  
 
         
 
   
                   
  
 
        

 
 
Alig confidence 

























..........................



























Template Conservation 
  
 
  
 
  




 
   
  ..........................         

    
     
      
Template Sequence  LPIGRSTLVSGTSGTGKTLFSIQFLY. . . . . . . . . . . . . . . . . . . . . . . . . . NGIIEFDEPGVFVTFEETPQDIIKNARS
Template Known Secondary structure  TTSSTTSS..........................


SSS
GG
Template Predicted Secondary structure 








..........................






Template SS confidence 















































































   36...40.........50.........60. ........70.........80.........
 
   107..110.........120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 






































...
Query SS confidence 












































































. . .
Query Sequence  VLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASL. . .
Query Conservation 
                             
    
          

 


 

 

 

   
 







 

...
Alig confidence 
...............




























































...
Template Conservation   ...............                                                  
 


         
Template Sequence  F. . . . . . . . . . . . . . . GWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQY
Template Known Secondary structure  G...............T

TTS



SS

S

SST
S
STTTSTTT
Template Predicted Secondary structure 
...............

























Template SS confidence 















































































   90 .........100.........110.........120.........130.........140.........150....
 
   184.....190.........200.........210.
Predicted Secondary structure  .




Query SS confidence  .



























Query Sequence  . DPESARIVMDTLRDINQNDGITVVVTLH
Query Conservation  .
      
   
       
 






Alig confidence  .



























Template Conservation              
          

 
 
Template Sequence  DASSVVRRELFRLVARLKQIGATTVMTTE
Template Known Secondary structure 

T
Template Predicted Secondary structure 




Template SS confidence 




























   155....160.........170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions