Return to main results Retrieve Phyre Job Id

Job DescriptionP16677
Confidence100.00%DateThu Jan 5 11:35:18 GMT 2012
Rank3Aligned Residues239
% Identity26%Templated1g2912
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSHIELLGRTVQREGRLARD
Query Conservation 
  

    
   
    

  

  
  

   


 








  
 
         
 
   
            
Alig confidence 


.




















































...















.


Template Conservation 
  .
 
 

         
  

  
  

   
 
 









 
 
     ... 
 
   
  
     .   
Template Sequence  MAG. VRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPS. . . RGQIYIGDKLVADPEK. GIF
Template Known Secondary structure 
.TTTT

STTSSTSS

S...TTGGG.T
Template Predicted Secondary structure 

.


















...









.


Template SS confidence 















































































   1.. ......10.........20.........30.........40.........50...... ...60.........70.. ...
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  IRKSRAHTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
Query Conservation         
  
 
        

 
 
                             
    
          

 


 
Alig confidence 






























........








































Template Conservation         
    
   
    

 
 
    ........                 
    
          

 
  

Template Sequence  VPPKDRDIAMVFQSYALYPHMTVYDNIAFPL. . . . . . . . KLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQR
Template Known Secondary structure 

GGGSS
S




TTS
........TT

T
GGGTT

GGGS
Template Predicted Secondary structure 












........














Template SS confidence 















































































   76...80.........90.........100...... ...110.........120.........130.........140.......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF
Query Conservation 
 

 

   
 







 


      
   
       
 






         
 
 

  
 
   
   
 
Alig confidence 















































































Template Conservation 
 

 

   
 






  


      
   
  
    
 


  

         
 
  
  
 
   
    
Template Sequence  VALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEV
Template Known Secondary structure  T

S
TTTTS
T
S

STT
Template Predicted Secondary structure 






















Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   241........250..
Predicted Secondary structure 
Query SS confidence 











Query Sequence  DNERFDHLYRSI
Query Conservation              
Alig confidence 











Template Conservation         
    
Template Sequence  YDKPANTFVAGF
Template Known Secondary structure  S
SS
Template Predicted Secondary structure 



Template SS confidence 











   228.230.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions