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Job DescriptionP16677
Confidence98.08%DateThu Jan 5 11:35:18 GMT 2012
Rank100Aligned Residues172
% Identity10%Templatec3bh0A_
PDB info PDB header:replicationChain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  IHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLEN
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Template Sequence  YKRRNFVLIAARPSMGKTAFALKQAK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . NMSDNDDVVNLHSLEMGKKENIKRL
Template Known Secondary structure  B
TT


TTSS.............................TTT
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   192.......200.........210....... ..220.........230.........240..
 
   107..110.........120.........130.........140.........150.........160.........170 ........
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Query Sequence  VLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQ. . AKVILADE. . . . . .
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Template Sequence  IVTAGSINAQKIKAARRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEP
Template Known Secondary structure  TT

S

SS
TS


S

BTSSS


GGGSB
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   179180.........190.........200.........210.... .....220.......
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Query Sequence  . PIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD. . . . . . . . . . . . . . . . . . . YALRYCERIVALR
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Template Sequence  AKANDSRTNQISQISRDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRESGQLEQDADIIEFLY
Template Known Secondary structure  S
TTS
T



GGGTTSSS



GGGGTTTS
S
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   323......330.........340.........350.........360.........370.........380.........390.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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