Job Description P16677 Confidence 99.75% Date Thu Jan 5 11:35:18 GMT 2012 Rank 64 Aligned Residues 207 % Identity 14% Template c3a4mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase Resolution 1.79 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	A	L	L	G	P	S	G	S	G	K	S	T	L	L	R	H	L	S	G	L	I	T	G	D	K	S	V	G	S	H	I	E	L	L	G	R	T	V	Q	R	E	G	R	L	A	R	D	I	R	K	S	R	A	H	T	G	Y	I	F	Q	Q	F	N	L	V	N	R	L	S	V	L	E	N	V	L	I	G	A
Query Conservation
Alig confidence																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	I	L	T	G	L	P	G	V	G	K	S	T	F	S	K	N	L	A	K	I	L	S	K	N	.	.	.	N	I	D	V	I	V	L	G	S	D	L	I	R	E	S	F	P	V	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	K	Y	E	E	F	I	K	K	S	T	Y	R	L	I	D	S
Template Known Secondary structure									T	T	S	S															T	.	.	.	T								T					T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		L	G	S	T	P	F	W	R	T	C	F	S	W	F	T	G	E	Q	K	Q	R	A	L	Q	A	L	T	R	V	G	M	V	H	F	.	.	.	A	H	Q	R	V	S	T	L	S	G	G	Q	Q	Q	R	.	.	.	.	.	.	.	.	.	V	A	I	A	R	A	L	M	Q	Q	A	K	V	I	L	A	D	E	P
Query Conservation																																				.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	N	Y	W	V	I	V	D	D	T	N	Y	Y	N	S	M	R	R	D	L	I	N	I	A	K	K	Y	N	K	N	Y	A	I	I	Y	L	K	A	S	L	D	V	L	I	R	R	N	I	E	R	G	E	K	I	P	N	E	V	I	K	K	M	Y	E	K	F	D	E	P	G	K	K	Y	K	W	D	E	P
Template Known Secondary structure				T	T	S						S				S														T	T																						T	T		S	S															T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		I	A	S	L	D	P	E	S	A	R	I	V	M	D	T	L	R	D	I	N	Q	N	D	G	I	T	V	V	V	T	L	H	Q	V	D	Y	A	L	R	Y	C	E	R	I	V	.	.	A	L	R	Q	G	H	V	F	Y	D	G	S	S	Q	Q	F	D	N	E	R	F	D	H	L	Y	R	S	I	N	R	V	E	E
Query Conservation																																															.	.
Alig confidence																									.	.																					.	.																		.	.
Template Conservation																									.	.																																								.	.
Template Sequence		F	L	I	I	D	T	T	K	D	I	D	F	N	E	I	A	K	K	L	I	E	K	S	.	.	K	E	I	P	K	F	N	I	S	D	K	I	D	K	E	T	R	K	I	V	S	E	Y	I	K	S	K	K	L	D	K	D	K	I	K	E	V	V	E	.	.	L	R	K	E	F	L	K	K	I	K	K	V	D	A
Template Known Secondary structure		S					T	T	S																.	.	T	S																									T	T												.	.
Template Predicted Secondary structure																									.	.																																								.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.
		258	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions