Job Description P16677 Confidence 100.00% Date Thu Jan 5 11:35:18 GMT 2012 Rank 30 Aligned Residues 220 % Identity 28% Template c2yz2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		M	Q	T	I	I	R	V	E	K	L	A	K	T	F	N	Q	.	.	.	.	.	H	Q	A	L	H	A	V	D	L	N	I	H	H	G	E	M	V	A	L	L	G	P	S	G	S	G	K	S	T	L	L	R	H	L	S	G	L	I	T	G	D	K	S	V	G	S	H	I	E	L	L	G	R	T	V	Q	R	E	G
Query Conservation																		.	.	.	.	.
Alig confidence				.	.													.	.	.	.	.																																										.	.	.														.	.
Template Conservation				.	.																																																											.	.	.														.	.
Template Sequence		M	R	.	.	I	E	V	V	N	V	S	H	I	F	H	R	G	T	P	L	E	K	K	A	L	E	N	V	S	L	V	I	N	E	G	E	C	L	L	V	A	G	N	T	G	S	G	K	S	T	L	L	Q	I	V	A	G	L	I	E	P	T	.	.	.	S	G	D	V	L	Y	D	G	E	R	K	K	G	.	.
Template Known Secondary structure				.	.											T	T	T	S	T	T														T	T								S	T	T											T	T	S	S			S	.	.	.							T	T						.	.
Template Predicted Secondary structure				.	.																																																											.	.	.														.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.
Predicted Secondary structure																					.																																																		.	.
Query SS confidence																					.																																																		.	.
Query Sequence		R	L	A	R	D	I	R	K	S	R	A	H	T	G	Y	I	F	Q	Q	.	F	N	L	V	N	R	L	S	V	L	E	N	V	L	I	G	A	L	G	S	T	P	F	W	R	T	C	F	S	W	F	T	G	E	Q	K	Q	R	A	L	Q	A	L	T	R	V	G	M	V	.	.	H	F	A	H	Q	R	V	S	T
Query Conservation																					.																																																		.	.
Alig confidence		.	.	.	.	.	.														.														.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	Y	E	I	R	R	N	I	G	I	A	F	Q	Y	P	E	D	Q	F	F	A	E	R	V	F	D	E	V	.	.	.	.	.	.	.	.	.	A	F	A	V	K	N	F	Y	P	D	R	D	P	V	P	L	V	K	K	A	M	E	F	V	G	L	D	F	D	S	F	K	D	R	V	P	F	F
Template Known Secondary structure		.	.	.	.	.	.				G	G	G						S	S	G	G	G	G				S	S						.	.	.	.	.	.	.	.	.									T	T	S														T							T	T	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
								74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	M	Q	Q	A	K	V	I	L	A	D	E	P	I	A	S	L	D	P	E	S	A	R	I	V	M	D	T	L	R	D	I	N	Q	N	D	G	I	T	V	V	V	T	L	H	Q	V	D	Y	A	L	R	Y	C	E	R	I	V	A	L	R	Q	G	H	V	F
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		L	S	G	G	E	K	R	R	V	A	I	A	S	V	I	V	H	E	P	D	I	L	I	L	D	E	P	L	V	G	L	D	R	E	G	K	T	D	L	L	R	I	V	E	K	W	.	K	T	L	G	K	T	V	I	L	I	S	H	D	I	E	T	V	I	N	H	V	D	R	V	V	V	L	E	K	G	K	K	V
Template Known Secondary structure		S															T	T			S						S	T	T	T	T																	.			T	T								S						G	G	G		S							T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	G	S	S	Q	Q	F	D	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	G	T	R	M	E	F	L	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions