Job Description P16677 Confidence 100.00% Date Thu Jan 5 11:35:18 GMT 2012 Rank 56 Aligned Residues 223 % Identity 20% Template c2r6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra Resolution 3.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	A	V	D	L	N	I	H	H	G	E	M	V	A	L	L	G	P	S	G	S	G	K	S	T	L	L	R	H	L	S	G	L	I	T	G	D	K	S	V	G	S	H	I	E	L	L	G	R	T	V	Q	R	E	G	R	L	A	R	D	I	R	K	S	R	A	H	T	G	Y	I	F	Q	Q	F	N	L	V
Query Conservation
Alig confidence																																									.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	A	S	T	N	E	A	K	V	R	G	Y	K	K	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	H	G	D	G	I	I	K	I	E	.	.	.	X	H	F	L	P	D	V	Y	V	P	C	E	V	C	H	G	.	.	.	.	.	.	.	.	.	K	R	Y	N	R	E	T	L	E	V	T	Y	K
Template Known Secondary structure					T	S						T	T			T	T	T	T		T	T	S	T	T	T	B		T	T	T	T	T		S						.	.	.		S	S	S								T	T	T	T	T	.	.	.	.	.	.	.	.	.			B		T	T	G	G	G			B	T
Template Predicted Secondary structure																																									.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.				.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.										.	.	.	.	.	770	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.
Predicted Secondary structure																																																.																											.	.	.
Query SS confidence																																																.																											.	.	.
Query Sequence		N	R	L	S	V	L	E	N	V	L	I	G	A	L	G	S	T	P	F	W	R	T	C	F	S	W	F	T	G	E	Q	K	Q	R	A	L	Q	A	L	T	R	V	G	M	V	H	.	F	A	H	Q	R	V	S	T	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	M	Q	Q	.	.	.	A	K	V	I
Query Conservation																																																.																											.	.	.
Alig confidence				.																.	.	.	.	.	.																							.																											.	.	.
Template Conservation				.																.	.	.	.	.	.
Template Sequence		G	K	.	N	I	A	E	V	L	D	X	T	V	E	D	A	L	D	.	.	.	.	.	.	F	F	A	S	I	P	K	I	K	R	K	L	E	T	L	Y	D	V	G	L	G	Y	X	K	L	G	Q	P	A	T	T	L	S	G	G	E	A	Q	R	V	K	L	A	A	E	L	H	R	R	S	N	G	R	T	L	Y
Template Known Secondary structure		T	B	.							T	S	B							.	.	.	.	.	.		T		S														T	T		S	S	S	B	T	T			G	G	G																S	S				S
Template Predicted Secondary structure				.																.	.	.	.	.	.
Template SS confidence
		778	.		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.							.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		L	A	D	E	P	I	A	S	L	D	P	E	S	A	R	I	V	M	D	T	L	R	D	I	N	Q	N	D	G	I	T	V	V	V	T	L	H	Q	V	D	Y	A	L	R	Y	C	E	R	I	V	A	L	.	.	.	.	.	.	R	Q	G	H	V	F	Y	D	G	S	S	Q	Q	F	D	N	E	R	F	D	H	L
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																													.																	.								.	.	.	.	.	.
Template Conservation																													.																	.
Template Sequence		I	L	D	E	P	T	T	G	L	H	V	D	D	I	A	R	L	L	D	V	L	H	R	L	V	D	N	.	G	D	T	V	L	V	I	E	H	N	L	D	V	I	K	T	.	A	D	Y	I	I	D	L	G	P	E	G	G	D	R	G	G	Q	I	V	A	V	G	T	P	E	E	V	A	E	V	K	E	S	H	T
Template Known Secondary structure						T	T	T	T																			T	.	T														T	T	.		S							S	S	S	T	T	S			S						S						T		T	T
Template Predicted Secondary structure																													.																	.
Template SS confidence
		851	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.		.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.		.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	S	I	N	R	V	E	E	N	A	K	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	Y	L	K	P	I	L	E	R	D	R	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		929	930	.	.	.	.	.	.	.	.	.	940	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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