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Job DescriptionP16677
Confidence100.00%DateThu Jan 5 11:35:18 GMT 2012
Rank27Aligned Residues223
% Identity30%Templatec2nq2C_
PDB info PDB header:metal transportChain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.... .....20.........30.........40.........50.........60.........70.........80
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Query Sequence  QTIIRVEKLAKTF. NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSHIELLGRTVQREGRLARD
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Template Sequence  NKALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPI. . . QGKIEVYQS. . . . . . . . . . .
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TTTTTT


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   2.......10.........20.........30.........40.........50........ .60.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  IRKSRAHTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
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Template Sequence  . . . . . . . IGFVPQFFSSPFAYSVLDIVLMGRSTHINTF. . . . AKPKSHDYQVAMQALDYLNLTHLAKREFTSLSGGQRQL
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   68.70.........80.........90........ .100.........110.........120.........130......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF
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Template Sequence  ILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFKFGETRNIL
Template Known Secondary structure  TT
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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   241........
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Query Sequence  DNERFDHLY
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Template Sequence  TSENLTALF
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   217..220.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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