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Job DescriptionP16677
Confidence97.07%DateThu Jan 5 11:35:18 GMT 2012
Rank163Aligned Residues172
% Identity12%Templatec2iusB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40........ .50.........60.........70.........80.........90.........
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Query Sequence  HAVDLNIHHGEMVALLGPSGSGKSTLLR. HLSGLITGDKSVGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVN
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Template Sequence  EPVVADLAKMPHLLVAGTTGSGASVGVNAMILSMLYKAQPEDVRFIMIDPK. MLELSVYEGIPHLLTEVVTDMKDAA. . .
Template Known Secondary structure 
GGGS
S

TTSSTT

TTT
TT.SSSSGGGTT
TTBSSS
B
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   975....980.........990.........1000.........1010.........1020..... ....1030.........1040.........1050
 
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Query Sequence  RLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEP
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Template Sequence  . . NALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWHPVLKK. . . . . . . . . . . . . . EPYIVVLVDE.
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   1051........1060.........1070.........1080.........1090.........1100... ......1110...
 
   180.........190......... 200.........210...
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Query Sequence  IASLDPESARIVMDTLRDIN. . . QNDGITVVVTLHQV
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Template Sequence  FADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRP
Template Known Secondary structure  TS

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   1123......1130.........1140.........1150.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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