Job Description P16677 Confidence 100.00% Date Thu Jan 5 11:35:18 GMT 2012 Rank 45 Aligned Residues 213 % Identity 25% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	T	I	I	R	V	E	K	L	A	K	T	F	N	Q	H	Q	A	L	H	A	V	D	L	N	I	H	H	G	E	M	V	A	L	L	G	P	S	G	S	G	K	S	T	L	L	R	H	L	S	G	L	I	T	G	D	K	S	V	G	S	H	I	E	L	L	G	R	T	V	Q	R	E	G	R	L	A	R	D
Query Conservation
Alig confidence																		.	.																																							.	.	.	.																	.	.	.	.
Template Conservation																		.	.																																							.	.	.	.																	.	.	.	.
Template Sequence		F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	.	.	.	.	E	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	.	.	.	.
Template Known Secondary structure		T																.	.	S										T	T								S	T	T	S	S									T	T	S	S			.	.	.	.							T	T			G	G	G	S			.	.	.	.
Template Predicted Secondary structure																		.	.																																							.	.	.	.																	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		I	R	K	S	R	A	H	T	G	Y	I	F	Q	Q	F	N	L	V	N	R	L	S	V	L	E	N	V	L	I	G	A	L	G	S	T	P	F	W	R	T	C	F	S	W	F	T	G	E	Q	K	Q	R	A	L	Q	A	L	T	R	V	G	M	V	H	F	A	H	Q	.	.	.	.	.	R	V	S	T	L	S	G
Query Conservation																																																																						.	.	.	.	.
Alig confidence		.																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation		.																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	N	S	I	R	S	I	I	G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G
Template Known Secondary structure		.					T	T						S	S					S	S	.	B							T	T	S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure		.																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.															.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	Q	Q	R	V	A	I	A	R	A	L	M	Q	Q	A	K	V	I	L	A	D	E	P	I	A	S	L	D	P	E	S	A	R	I	V	M	D	T	L	R	D	I	N	Q	N	D	G	I	T	V	V	V	T	L	H	Q	V	D	Y	A	L	R	Y	C	E	R	I	V	A	L	R	Q	G	H	V	F	Y	D	G
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.								.															.
Template Conservation																															.	.	.	.	.	.	.	.	.	.								.															.
Template Sequence		G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G
Template Known Secondary structure															T			S													.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.								.															.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		236	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		S	S	Q	Q	F	.	.	D	N	E	R	F	D	H	L	Y	R	S
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		T	H	K	D	L	L	K	L	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure										T	S								T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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